| Literature DB >> 32391140 |
Nicole Princic1, Donna McMorrow1, Philip Chan1, Lisa Hess2.
Abstract
BACKGROUND: Lack of using a validated algorithm to select patients is a source of selection bias in oncology studies using administrative claims. The objective of this study to evaluate published algorithms to identify patients with soft tissue sarcoma (STS) in administrative claims and to evaluate new algorithms to improved performance.Entities:
Keywords: Administrative claims; Coding; Methods; Soft tissue sarcoma
Year: 2020 PMID: 32391140 PMCID: PMC7199315 DOI: 10.1186/s13569-020-00130-y
Source DB: PubMed Journal: Clin Sarcoma Res ISSN: 2045-3329
Algorithms descriptions
| Description |
|---|
| 1) At least two medical claims with an ICD-CM diagnosis code for STS at least 30 days apart in any position [ |
| 2) At least two medical claims of any type at least 30 days apart with an ICD-CM diagnosis code for STS AND at least one claim for the prescription or administration of NCCN-recommended systemic therapy for STS treatment following the first STS diagnosis and within the diagnostic period [ |
| 3) At least one medical claim of any type with an ICD-CM diagnosis code for any non-STS solid tumor cancer AND No medical claims for any hematological cancers during the diagnostic period AND At least one claim for the prescription or administration of STS NCCN recommended regimen (single therapy or combination therapy identified by a 21 day window following the first treatment) on or following the diagnosis date and within the diagnostic period |
| 4) At least one medical claim of any type with an ICD-CM diagnosis code for retroperitoneal or peritoneal cancer AND No medical claims with an ICD-CM diagnosis code for gastrointestinal stromal tumors, osteosarcoma, Kaposi’s at any time during the diagnostic period AND No medical claims for reproductive cancers at any time during the diagnostic period AND No medical claims for excretory cancer at any time during the diagnostic period AND No medical claims for cardio/pulmonary cancer at any time during the diagnostic period AND At least one claim for the prescription or administration of STS NCCN recommended regimen on or following the diagnosis date and within the diagnostic period [ |
| 5a) At least one medical claim of any type with an ICD-CM diagnosis code for STS and a second claim for STS any time after |
| 5b) At least one medical claim of any type with an ICD-CM diagnosis code for STS and at least one claim for the prescription or administration of NCCN-recommended systemic therapy for STS treatment any time after |
| 5c) At least one medical claim of any type with an ICD-CM diagnosis code for STS and at least one claim for an STS surgery prior to or following |
| 5d) At least one medical claim of any type with an ICD-CM diagnosis code for STS and at least one claim for an STS symptom (pain in limb, localized superficial swelling mass lump, neoplasm or uncertain behavior in skin) prior |
| 5e) At least one medical claim of any type with an ICD-CM diagnosis code for STS and (a second claim for STS following, or STS treatment following, or STS surgery prior to or following, or an STS symptom prior to) |
| 6a) At least one medical claim of any type with an ICD-CM diagnosis code for STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer and a second claim for STS anytime following |
| 6b) At least one medical claim of any type with an ICD-CM diagnosis code for STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer and at least one claim for the prescription or administration of NCCN-recommended systemic therapy for STS treatment following |
| 6c) At least one medical claim of any type with an ICD-CM diagnosis code for STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer and at least one claim for an STS surgery prior to or following |
| 6d) At least one medical claim of any type with an ICD-CM diagnosis code for STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer and at least one claim for an STS symptom prior |
| 6e) At least one medical claim of any type with an ICD-CM diagnosis code for STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer and (a second claim for STS anytime following, or STS treatment following, or STS surgery prior to or following, or an STS symptom prior) |
NCCN recommended single agents and combination regimens
| Single agents |
|---|
| Doxorubicin |
| Ifosfamide |
| Epirubicin |
| Gemcitabine |
| Dacarbazine |
| Liposomal doxorubicin |
| Temozolomide |
| Vinorelbine |
| Eribulin |
| Trabectedin |
| Pazopanib |
| Regorafenib |
| Larotrectinib |
Fig. 1Case and control patient identification. a Eligible cancer diagnosis for control include all primary malignancies with the exception of STS, hematological malignancies, GIST, osteosarcoma, or Kaposi’s sarcoma. b For cases, the observation period is the number of days from the STS diagnosis in the EMR to disenrollment in claims or the end of the study period (7/31/2018). For controls, the observation period is the longest period of overlap of enrollment in both claims and EMR during the study period of 1/1/2000 through 7/31/2018
Cases and controls: development sample—demographics at index cancer diagnosis
| Controls | Cases | |
|---|---|---|
| Age, mean (SD) | 64.2 (12.7) | 59.6 (14.8) |
| Age group, N (%) | ||
| 18–24 | 2958 (0.2%) | 48 (0.4%) |
| 25–34 | 21,453 (1.2%) | 407 (3.7%) |
| 35–44 | 89,631 (5.0%) | 1280 (11.7%) |
| 45–54 | 274,468 (15.3%) | 2093 (19.2%) |
| 55–64 | 569,910 (31.7%) | 3345 (30.7%) |
| 65–74 | 425,923 (23.7%) | 1792 (16.4%) |
| 75+ | 415,736 (23.1%) | 1941 (17.8%) |
| Gender, N (%) | ||
| Male | 829,010 (46.1%) | 4998 (45.8%) |
| Female | 971,069 (54.0%) | 5908 (54.2%) |
Cases and controls: development sample—diagnoses, treatments, procedures, symptoms at index cancer diagnosis
| Controls | Cases | |
|---|---|---|
| Cancer diagnoses following index | ||
| STS diagnosis, N (%) | 11,054 (0.6%) | 7590 (69.6%) |
| Number of STS diagnoses, mean (SD) | 0.0 (0.9) | 12.6 (20.0) |
| Non-STS cancer diagnosis, N (%) | 1593,963 (88.6%) | 8115 (74.4%) |
| Number of non-STS cancer diagnoses, mean (SD) | 14.5 (16.7) | 10.5 (15.2) |
| Treatments | ||
| Any STS NCCN recommended treatment prior to index, N (%) | 209,021 (11.6%) | 2674 (24.5%) |
| Any STS NCCN recommended treatment following index, N (%) | 171,301 (9.5%) | 2548 (23.4%) |
| Days from index diagnosis date to treatment, mean (SD) | 32.0 (42.0) | 35.1 (43.6) |
| Regimen type, among those with treatment, N (%) | ||
| NCCN recommended single agent | 163,261 (95.3%) | 1154 (45.3%) |
| NCCN combination regimen | 2819 (1.7%) | 1164 (45.7%) |
| Not a valid single agent or combination regimen | 5221 (3.1%) | 230 (9.0%) |
| Symptoms measured prior to index, N (%) | ||
| Neoplasm of uncertain behavior in skin | 117,979 (6.6%) | 696 (6.4%) |
| Pain in limb | 129,494 (7.2%) | 1097 (10.1%) |
| Localized superficial swelling mass lump | 15,017 (0.8%) | 967 (8.9%) |
| Days from symptom to index, mean (SD) | ||
| Neoplasm of uncertain behavior in skin | 65.7 (49.7) | 84.6 (50.2) |
| Pain in limb | 76.0 (51.7) | 74.6 (54.3) |
| Localized superficial swelling mass lump | 79.9 (50.5) | 89.4 (50.4) |
| Post diagnosis surgical procedures, N (%) | ||
| Excision surgery | 377,857 (21.0%) | 2055 (18.8%) |
| Resection surgery | 194,687 (10.8%) | 1189 (10.9%) |
| Number of procedures, mean (SD) | ||
| Excision surgery | 1.4 (0.9) | 1.4 (0.9) |
| Resection surgery | 1.1 (0.4) | 1.1 (0.5) |
| Pre-diagnosis surgical procedures, N (%) | ||
| Excision surgery | 485,480 (27.0%) | 3552 (32.6%) |
| Resection surgery | 285,294 (15.9%) | 2341 (21.5%) |
| Number of procedures, mean (SD) | ||
| Excision surgery | 1.4 (0.8) | 1.4 (0.8) |
| Resection surgery | 1.1 (0.4) | 1.1 (0.4) |
| Imaging scans (measured prior to or on index), N (%) | ||
| Computerized tomography scan | 1,051,001 (58.4%) | 9401 (86.2%) |
| Magnetic resonance imaging | 445,463 (24.8%) | 4785 (43.9%) |
| Radiograph | 1,135,315 (63.1%) | 7797 (71.5%) |
| Positron-emission tomography scan | 328,534 (18.3%) | 3487 (32.0%) |
| Number of tests, mean (SD) | ||
| Computerized tomography scan | 3.7 (6.4) | 4.5 (6.1) |
| Magnetic resonance imaging | 1.4 (0.9) | 1.5 (0.8) |
| Radiograph | 2.3 (1.9) | 2.5 (1.9) |
| Positron-emission tomography scan | 1.2 (0.4) | 1.4 (0.6) |
| Number of different scans, mean (SD) | 4.1 (5.9) | 6.8 (6.6) |
Algorithm test results
| Short description | Algorithm | Sensitivity (%) | Specificity (%) | PPV (%) | NPV (%) |
|---|---|---|---|---|---|
| One STS diagnosis + a second STS diagnosis at least 30 days after the first | Algorithm 1 | 59.0 | 79.7 | 43.2 | 88.1 |
| One STS diagnosis + a second STS diagnosis at least 30 days after the first + any NCCN recommended pharmacologic treatment for STS | Algorithm 2 | 16.4 | 97.0 | 58.8 | 81.6 |
| One solid tumor cancer diagnosis + no evidence of hematologic cancer + an STS NCCN recommended single or combination regimen of pharmacologic treatment | Algorithm 3 | 2.2 | 99.5 | 1.5 | 99.7 |
| One diagnosis of retroperitoneal or peritoneal cancer + no evidence of GIST, osteosarcoma, Kaposi’s + no reproductive cancer, no excretory cancer + no cardio/pulmonary cancer + an STS NCCN recommended single or combination regimen of pharmacologic treatment | Algorithm 4 | 15.4 | 97.0 | 24.0 | 95.0 |
| One STS diagnosis + a second STS diagnosis any time after | Algorithm 5a | 67.4 | 71.9 | 38.5 | 89.4 |
| One STS diagnosis + any STS NCCN recommended pharmacologic treatment | Algorithm 5b | 18.1 | 93.8 | 43.4 | 81.4 |
| One STS diagnosis + surgery | Algorithm 5c | 59.1 | 54.0 | 25.2 | 83.5 |
| One STS diagnosis + symptom | Algorithm 5d | 32.0 | 79.2 | 28.8 | 81.7 |
| One STS diagnosis (+ second STS diagnosis or treatment or surgery or symptom) | Algorithm 5e | 80.3 | 42.3 | 26.7 | 89.1 |
| One STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer diagnosis + STS diagnosis following | Algorithm 6a | 63.4 | 99.3 | 38.5 | 99.8 |
| One STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer diagnosis + any STS NCCN recommended pharmacologic treatment | Algorithm 6b | 19.0 | 91.5 | 1.5 | 99.4 |
| One STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer diagnosis + surgery | Algorithm 6c | 64.0 | 46.2 | 0.8 | 99.5 |
| One STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer diagnosis + symptom | Algorithm 6d | 36.0 | 76.8 | 1.0 | 99.4 |
| One STS, Ill-defined cancer, reproductive cancer, retroperitoneal or peritoneal cancer diagnosis (+ second STS diagnosis or treatment or surgery or symptom) | Algorithm 6e | 84.7 | 39.2 | 0.9 | 99.7 |