Literature DB >> 32388402

Higher dimensional metabolomics using stable isotope labeling for identifying the missing specialized metabolism in plants.

Ryo Nakabayashi1, Kazuki Saito2.   

Abstract

The exact mechanics of specialized metabolism and its importance throughout plant evolution remain mysterious. Specialized metabolites and their corresponding biosynthetic genes are crucial to understand the reason for the prevalence of certain metabolism. Even though mass spectrometry-based metabolomics has enabled us to acquire data about the structural properties of unknown specialized metabolites as well as known metabolites and their corresponding isomers/analogs, extensive analytical approaches are still required. Herein, we review the most advanced analytical approaches using stable isotope labeling that can be used to identify the unknown specialized metabolites.
Copyright © 2020 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Year:  2020        PMID: 32388402     DOI: 10.1016/j.pbi.2020.02.009

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  5 in total

1.  Sample Preparation, Data Acquisition, and Data Analysis for 15N-Labeled and Nonlabeled Monoterpene Indole Alkaloids in Catharanthus roseus.

Authors:  Ryo Nakabayashi
Journal:  Methods Mol Biol       Date:  2022

2.  Stable isotope approaches and opportunities for improving plant conservation.

Authors:  Keirith A Snyder; Sharon A Robinson; Susanne Schmidt; Kevin R Hultine
Journal:  Conserv Physiol       Date:  2022-08-10       Impact factor: 3.252

3.  Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis.

Authors:  Amit Rai; Hideki Hirakawa; Ryo Nakabayashi; Shinji Kikuchi; Koki Hayashi; Megha Rai; Hiroshi Tsugawa; Taiki Nakaya; Tetsuya Mori; Hideki Nagasaki; Runa Fukushi; Yoko Kusuya; Hiroki Takahashi; Hiroshi Uchiyama; Atsushi Toyoda; Shoko Hikosaka; Eiji Goto; Kazuki Saito; Mami Yamazaki
Journal:  Nat Commun       Date:  2021-01-15       Impact factor: 14.919

4.  Metabolite Profiling and Classification of Highbush Blueberry Leaves under Different Shade Treatments.

Authors:  Yaqiong Wu; Hao Yang; Zhengjin Huang; Chunhong Zhang; Lianfei Lyu; Weilin Li; Wenlong Wu
Journal:  Metabolites       Date:  2022-01-14

Review 5.  Past accomplishments and future challenges of the multi-omics characterization of leaf growth.

Authors:  Aleksandra Skirycz; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2022-06-01       Impact factor: 8.005

  5 in total

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