Literature DB >> 32386307

The promises and the challenges of integrating multi-omics and systems biology in comparative stress biology.

Tonia S Schwartz1.   

Abstract

Comparative stress biology is inherently a systems biology approach with the goal of integrating the molecular, cellular and physiological responses with fitness outcomes. In this way the systems biology approach is expected to provide a holistic understanding of how different stressors result in different fitness outcomes, and how different individuals (or populations or species) respond to stressors differently. In this perceptive article I focus on the use of multiple types of -omics data in stress biology. Targeting students and those researchers who are considering integrating -omics approaches, I discuss the promise of the integration of these measures for furthering our holistic understanding of how organisms respond to different stressors. I also discuss the logistical and conceptual challenges encountered when working with -omics data and the current hurdles to fully utilize these data in studies of stress biology in non-model organisms.
© The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved. For permissions please email: journals.permissions@oup.com.

Entities:  

Keywords:  Non-model; proteomics; stressors; transcriptomics

Year:  2020        PMID: 32386307     DOI: 10.1093/icb/icaa026

Source DB:  PubMed          Journal:  Integr Comp Biol        ISSN: 1540-7063            Impact factor:   3.326


  4 in total

1.  Family-effects in the epigenomic response of red blood cells to a challenge test in the European sea bass (Dicentrarchus labrax, L.).

Authors:  Madoka Vera Krick; Erick Desmarais; Athanasios Samaras; Elise Guéret; Arkadios Dimitroglou; Michalis Pavlidis; Costas Tsigenopoulos; Bruno Guinand
Journal:  BMC Genomics       Date:  2021-02-09       Impact factor: 3.969

2.  Integrating omics to characterize eco-physiological adaptations: How moose diet and metabolism differ across biogeographic zones.

Authors:  Christian Fohringer; Ilona Dudka; Robert Spitzer; Fredrik Stenbacka; Olena Rzhepishevska; Joris P G M Cromsigt; Gerhard Gröbner; Göran Ericsson; Navinder J Singh
Journal:  Ecol Evol       Date:  2021-03-04       Impact factor: 2.912

3.  Integration of genome-wide association studies and gene coexpression networks unveils promising soybean resistance genes against five common fungal pathogens.

Authors:  Fabricio Almeida-Silva; Thiago M Venancio
Journal:  Sci Rep       Date:  2021-12-27       Impact factor: 4.379

Review 4.  Trends in the Application of "Omics" to Ecotoxicology and Stress Ecology.

Authors:  Joshua Niklas Ebner
Journal:  Genes (Basel)       Date:  2021-09-23       Impact factor: 4.096

  4 in total

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