| Literature DB >> 32382712 |
Kasper Mønsted Pedersen1,2,3, Yunus Çolak1,2,3, Christina Ellervik3,4,5, Hans Carl Hasselbalch3,6, Stig Egil Bojesen1,2,3, Børge Grønne Nordestgaard1,2,3.
Abstract
BACKGROUND: Whether inflammation is independently associated with development of JAK2V617F mutation and myeloproliferative neoplasm is not clear. We tested the hypothesis that a loss-of-function polymorphism in IL6R (marked by rs4537545) reduces risk of JAK2V617F mutation and myeloproliferative neoplasm in a Mendelian randomization study.Entities:
Keywords: Drug target; Essential thrombocythemia; Mendelian randomization; Myelofibrosis; Myeloproliferative neoplasm; Polycythemia vera
Year: 2020 PMID: 32382712 PMCID: PMC7201035 DOI: 10.1016/j.eclinm.2020.100280
Source DB: PubMed Journal: EClinicalMedicine ISSN: 2589-5370
Fig. 1Genomic location of the IL6R gene and directed acyclic graph for Mendelian randomization including underlying assumptions. In this Mendelian randomization study, IL6R rs4537545 is used as a proxy for impaired interleukin-6 receptor signaling without being influenced by confounding or reverse causation due to the random distribution of genes at conception and since genes are present at birth. Thus, the independent relationship between chronic low-grade inflammation and the JAK2V617F somatic mutation and myeloproliferative neoplasm can be tested. Assumption 1) the genotype is robustly associated with the risk factor i.e. the IL6R rs4537545 genotype is associated with chronic low-grade inflammation. Assumption 2) the genotype is independent of confounding factors that confound the association between the risk factor and outcome, i.e. no association between the IL6R rs4537545 genotype and potential confounders. Assumption 3) the genotype is related to the outcome only by its association with the risk factor, i.e. no horizontal pleiotropy in the association between the IL6R rs4537545 genotype with the JAK2V617F somatic mutation and myeloproliferative neoplasm. D’, R2, and distance between single nucleotide polymorphisms are obtained from the National Cancer Institute in individuals of European ancestry (https://ldlink.nci.nih.gov/?tab=ldmatrix). rs4537545 represents a C>T exchange; rs2228145 represents Asp358Ala.
Potential confounders for individuals in the Copenhagen general population study according to the IL6R rs4537545 genotype.
| C/C | C/T | T/T | ||
|---|---|---|---|---|
| Age, years | 58·1 (48·2–67·4) | 58·2 (48·2–67·5) | 58·4 (48·3–67·7) | 0·020 |
| Men, no. (%) | 16,463 (45) | 23,685 (45) | 8424 (45) | 0·11 |
| Body mass index, kg/m2 | 25·6 (23·2–28·4) | 25·5 (23·2–28·4) | 25·6 (23·2–28·4) | 0·83 |
| Never-smokers, no. (%) | 15,341 (42) | 21,903 (42) | 7867 (42) | 0·15 |
| Former smokers, no. (%) | 15,095 (41) | 21,460 (41) | 7469 (40) | 0·12 |
| Current smokers, no. (%) | 6296 (17) | 8964 (17) | 3193 (17) | 0·82 |
| Cumulative tobacco consumption, pack-years | 16 (6–30) | 15 (6–30) | 16 (6–30) | 0·30 |
| Alcohol consumption, units/week | 8 (4–15) | 8 (4–15) | 8 (4–15) | 0·40 |
| Low leisure-time physical activity, no. (%) | 2272 (6·2) | 3279 (6·3) | 1103 (6·0) | 0·41 |
| Low education, no. (%) | 5762 (16) | 8228 (16) | 2989 (16) | 0·25 |
| Low annual household income, no. (%) | 4494 (12) | 6590 (13) | 2396 (13) | 0·018 |
| Any chronic disease, no. (%) | 6297 (17) | 9080 (17) | 3185 (17) | 0·73 |
| Cancer, no. (%) | 2487 (6·8) | 3653 (7·0) | 1295 (7·0) | 0·25 |
| Ischaemic heart disease, no. (%) | 2129 (5·8) | 3043 (5·8) | 1043 (5·6) | 0·52 |
| Diabetes, no. (%) | 1619 (4·4) | 2202 (4·2) | 769 (4·1) | 0·11 |
| Rheumatoid arthritis, no. (%) | 322 (0·9) | 513 (1·0) | 148 (0·8) | 0·73 |
| Chronic obstructive pulmonary disease, no. (%) | 762 (2·1) | 1108 (2·1) | 415 (2·2) | 0·23 |
Data are summarized as medians with the 25th and 75th percentiles, or numbers with percent.
P-values were derived from Wald's test in linear regression models for continuous covariates and logistic regression models for dichotomous covariates.
When P for trend is adjusted for 17 individual trend analyses according to the Bonferroni method, P = 0·05 is equivalent to P = 0·05/17=0·003.
Included only former and current smokers.
12 g = 1 unit of alcohol.
Being completely sedentary or doing light physical activity less than 2 h/week.
<9 years of school attendance.
Annual household income <200,000 DKK (approximately 30,000 USD).
Cancer was based on all cancer forms except for nonmelanoma skin cancer.
Fig. 2Association of the IL6R rs4537545 genotype and risk of JAK2V617F somatic mutation and myeloproliferative neoplasm. Odds ratios were obtained from logistic regression analysis adjusted for age and sex. Hazard ratios were obtained from Cox regression analysis adjusted for age and sex. CI = confidence interval. HR = hazard ratio. OR = odds ratio.
Fig. 3Cumulative incidence of myeloproliferative neoplasm according to the IL6R rs4537545 genotype. Cumulative incidence and subdistribution hazard ratios were obtained from competing-risk analysis according to Fine and Gray with death and emigration as competing events, adjusted for age and sex. P for trend was obtained from Wald's test. CI = confidence interval. SHR = subdistribution hazard ratio.
Fig. 4Association between the IL6R rs4537545 genotype and risk of JAK2V617F somatic mutation and myeloproliferative neoplasm according to potential risk factors. Odds ratios were obtained from logistic regression analysis adjusted for age and sex. Hazard ratios were obtained from Cox regression analysis adjusted for age and sex. P-values for interaction were obtained from the likelihood ratio test. *Corresponds to the median age of individuals with myeloproliferative neoplasm at baseline examination. CI = confidence interval. HR = hazard ratio. OR = odds ratio.
Fig. 5Association of the IL6R rs4537545 genotype and risk of JAK2V617F somatic mutation positive and negative myeloproliferative neoplasm. Hazard ratios were obtained from Cox regression analysis adjusted for age and sex. JAK2V617F status was determined at baseline examination. CI = confidence interval. HR = hazard ratio.