Literature DB >> 32382123

The genomics of coloration provides insights into adaptive evolution.

Anna Orteu1, Chris D Jiggins2.   

Abstract

Coloration is an easily quantifiable visual trait that has proven to be a highly tractable system for genetic analysis and for studying adaptive evolution. The application of genomic approaches to evolutionary studies of coloration is providing new insight into the genetic architectures underlying colour traits, including the importance of large-effect mutations and supergenes, the role of development in shaping genetic variation and the origins of adaptive variation, which often involves adaptive introgression. Improved knowledge of the genetic basis of traits can facilitate field studies of natural selection and sexual selection, making it possible for strong selection and its influence on the genome to be demonstrated in wild populations.

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Year:  2020        PMID: 32382123     DOI: 10.1038/s41576-020-0234-z

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  89 in total

Review 1.  A protean palette: colour materials and mixing in birds and butterflies.

Authors:  Matthew D Shawkey; Nathan I Morehouse; Peter Vukusic
Journal:  J R Soc Interface       Date:  2009-01-13       Impact factor: 4.118

Review 2.  Evolution of coloration patterns.

Authors:  Meredith E Protas; Nipam H Patel
Journal:  Annu Rev Cell Dev Biol       Date:  2008       Impact factor: 13.827

Review 3.  The biology of color.

Authors:  Innes C Cuthill; William L Allen; Kevin Arbuckle; Barbara Caspers; George Chaplin; Mark E Hauber; Geoffrey E Hill; Nina G Jablonski; Chris D Jiggins; Almut Kelber; Johanna Mappes; Justin Marshall; Richard Merrill; Daniel Osorio; Richard Prum; Nicholas W Roberts; Alexandre Roulin; Hannah M Rowland; Thomas N Sherratt; John Skelhorn; Michael P Speed; Martin Stevens; Mary Caswell Stoddard; Devi Stuart-Fox; Laszlo Talas; Elizabeth Tibbetts; Tim Caro
Journal:  Science       Date:  2017-08-04       Impact factor: 47.728

4.  Lateral transfer of genes from fungi underlies carotenoid production in aphids.

Authors:  Nancy A Moran; Tyler Jarvik
Journal:  Science       Date:  2010-04-30       Impact factor: 47.728

5.  Carotenoids need structural colours to shine.

Authors:  Matthew D Shawkey; Geoffrey E Hill
Journal:  Biol Lett       Date:  2005-06-22       Impact factor: 3.703

Review 6.  Carotenoid metabolism in plants.

Authors:  Nazia Nisar; Li Li; Shan Lu; Nay Chi Khin; Barry J Pogson
Journal:  Mol Plant       Date:  2014-12-17       Impact factor: 13.164

7.  Genetic Mapping and Biochemical Basis of Yellow Feather Pigmentation in Budgerigars.

Authors:  Thomas F Cooke; Curt R Fischer; Ping Wu; Ting-Xin Jiang; Kathleen T Xie; James Kuo; Elizabeth Doctorov; Ashley Zehnder; Chaitan Khosla; Cheng-Ming Chuong; Carlos D Bustamante
Journal:  Cell       Date:  2017-10-05       Impact factor: 41.582

8.  Genetic Basis for Red Coloration in Birds.

Authors:  Ricardo J Lopes; James D Johnson; Matthew B Toomey; Mafalda S Ferreira; Pedro M Araujo; José Melo-Ferreira; Leif Andersson; Geoffrey E Hill; Joseph C Corbo; Miguel Carneiro
Journal:  Curr Biol       Date:  2016-05-19       Impact factor: 10.834

9.  Red Carotenoid Coloration in the Zebra Finch Is Controlled by a Cytochrome P450 Gene Cluster.

Authors:  Nicholas I Mundy; Jessica Stapley; Clair Bennison; Rachel Tucker; Hanlu Twyman; Kang-Wook Kim; Terry Burke; Tim R Birkhead; Staffan Andersson; Jon Slate
Journal:  Curr Biol       Date:  2016-05-19       Impact factor: 10.834

10.  Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard.

Authors:  Pedro Andrade; Catarina Pinho; Guillem Pérez I de Lanuza; Sandra Afonso; Jindřich Brejcha; Carl-Johan Rubin; Ola Wallerman; Paulo Pereira; Stephen J Sabatino; Adriana Bellati; Daniele Pellitteri-Rosa; Zuzana Bosakova; Ignas Bunikis; Miguel A Carretero; Nathalie Feiner; Petr Marsik; Francisco Paupério; Daniele Salvi; Lucile Soler; Geoffrey M While; Tobias Uller; Enrique Font; Leif Andersson; Miguel Carneiro
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-28       Impact factor: 11.205

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  17 in total

1.  Integrated Analysis of Coding Genes and Non-coding RNAs Associated with Shell Color in the Pacific Oyster (Crassostrea gigas).

Authors:  Zhuanzhuan Li; Qi Li; Shikai Liu; Ziqiang Han; Lingfeng Kong; Hong Yu
Journal:  Mar Biotechnol (NY)       Date:  2021-04-30       Impact factor: 3.619

2.  A combined RAD-Seq and WGS approach reveals the genomic basis of yellow color variation in bumble bee Bombus terrestris.

Authors:  Sarthok Rasique Rahman; Jonathan Cnaani; Lisa N Kinch; Nick V Grishin; Heather M Hines
Journal:  Sci Rep       Date:  2021-04-12       Impact factor: 4.379

3.  Concerted variation in melanogenesis genes underlies emergent patterning of plumage in capuchino seedeaters.

Authors:  Cecilia Estalles; Sheela P Turbek; María José Rodríguez-Cajarville; Luís Fábio Silveira; Kazumasa Wakamatsu; Shosuke Ito; Irby J Lovette; Pablo L Tubaro; Darío A Lijtmaer; Leonardo Campagna
Journal:  Proc Biol Sci       Date:  2022-01-12       Impact factor: 5.349

4.  Genetic isolation by distance underlies colour pattern divergence in red-eyed treefrogs (Agalychnis callidryas).

Authors:  Meaghan I Clark; Gideon S Bradburd; Maria Akopyan; Andres Vega; Erica Bree Rosenblum; Jeanne M Robertson
Journal:  Mol Ecol       Date:  2022-01-28       Impact factor: 6.185

5.  Broad tiger stripes in a small habitat patch.

Authors:  Eduardo Eizirik
Journal:  Proc Natl Acad Sci U S A       Date:  2021-10-12       Impact factor: 11.205

6.  Ecological basis and genetic architecture of crypsis polymorphism in the desert clicker grasshopper (Ligurotettix coquilletti).

Authors:  Timothy K O'Connor; Marissa C Sandoval; Jiarui Wang; Jacob C Hans; Risa Takenaka; Myron Child; Noah K Whiteman
Journal:  Evolution       Date:  2021-08-17       Impact factor: 3.694

7.  Extensive hybridization reveals multiple coloration genes underlying a complex plumage phenotype.

Authors:  Stepfanie M Aguillon; Jennifer Walsh; Irby J Lovette
Journal:  Proc Biol Sci       Date:  2021-01-20       Impact factor: 5.349

8.  Developmental Transcriptomics Reveals a Gene Network Driving Mimetic Color Variation in a Bumble Bee.

Authors:  Sarthok Rasique Rahman; Tatiana Terranova; Li Tian; Heather M Hines
Journal:  Genome Biol Evol       Date:  2021-06-08       Impact factor: 3.416

9.  Many ways to make darker flies: Intra- and interspecific variation in Drosophila body pigmentation components.

Authors:  Elvira Lafuente; Filipa Alves; Jessica G King; Carolina M Peralta; Patrícia Beldade
Journal:  Ecol Evol       Date:  2021-05-25       Impact factor: 3.167

10.  Simple inheritance of color and pattern polymorphism in the steppe grasshopper Chorthippus dorsatus.

Authors:  Gabe Winter; Mahendra Varma; Holger Schielzeth
Journal:  Heredity (Edinb)       Date:  2021-04-16       Impact factor: 3.821

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