Literature DB >> 32379792

Modeling and mitigation of high-concentration antibody viscosity through structure-based computer-aided protein design.

James R Apgar1, Amy S P Tam1, Rhady Sorm1, Sybille Moesta1, Amy C King1, Han Yang1, Kerry Kelleher1, Denise Murphy1, Aaron M D'Antona1, Guoying Yan1, Xiaotian Zhong1, Linette Rodriguez1, Weijun Ma1, Darren E Ferguson1, Gregory J Carven1, Eric M Bennett1, Laura Lin1.   

Abstract

For an antibody to be a successful therapeutic many competing factors require optimization, including binding affinity, biophysical characteristics, and immunogenicity risk. Additional constraints may arise from the need to formulate antibodies at high concentrations (>150 mg/ml) to enable subcutaneous dosing with reasonable volume (ideally <1.0 mL). Unfortunately, antibodies at high concentrations may exhibit high viscosities that place impractical constraints (such as multiple injections or large needle diameters) on delivery and impede efficient manufacturing. Here we describe the optimization of an anti-PDGF-BB antibody to reduce viscosity, enabling an increase in the formulated concentration from 80 mg/ml to greater than 160 mg/ml, while maintaining the binding affinity. We performed two rounds of structure guided rational design to optimize the surface electrostatic properties. Analysis of this set demonstrated that a net-positive charge change, and disruption of negative charge patches were associated with decreased viscosity, but the effect was greatly dependent on the local surface environment. Our work here provides a comprehensive study exploring a wide sampling of charge-changes in the Fv and CDR regions along with targeting multiple negative charge patches. In total, we generated viscosity measurements for 40 unique antibody variants with full sequence information which provides a significantly larger and more complete dataset than has previously been reported.

Entities:  

Year:  2020        PMID: 32379792     DOI: 10.1371/journal.pone.0232713

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  6 in total

1.  Separating clinical antibodies from repertoire antibodies, a path to in silico developability assessment.

Authors:  Christopher Negron; Joyce Fang; Michael J McPherson; W Blaine Stine; Andrew J McCluskey
Journal:  MAbs       Date:  2022 Jan-Dec       Impact factor: 6.440

2.  Antibodies with Weakly Basic Isoelectric Points Minimize Trade-offs between Formulation and Physiological Colloidal Properties.

Authors:  Priyanka Gupta; Emily K Makowski; Sandeep Kumar; Yulei Zhang; Justin M Scheer; Peter M Tessier
Journal:  Mol Pharm       Date:  2022-02-02       Impact factor: 5.364

3.  Structure-based charge calculations for predicting isoelectric point, viscosity, clearance, and profiling antibody therapeutics.

Authors:  Nels Thorsteinson; John R Gunn; Kenneth Kelly; Will Long; Paul Labute
Journal:  MAbs       Date:  2021 Jan-Dec       Impact factor: 5.857

Review 4.  Toward Drug-Like Multispecific Antibodies by Design.

Authors:  Manali S Sawant; Craig N Streu; Lina Wu; Peter M Tessier
Journal:  Int J Mol Sci       Date:  2020-10-12       Impact factor: 5.923

5.  Identifying biophysical assays and in silico properties that enrich for slow clearance in clinical-stage therapeutic antibodies.

Authors:  Boris Grinshpun; Nels Thorsteinson; Joao Ns Pereira; Friedrich Rippmann; David Nannemann; Vanita D Sood; Yves Fomekong Nanfack
Journal:  MAbs       Date:  2021 Jan-Dec       Impact factor: 5.857

Review 6.  Discovery-stage identification of drug-like antibodies using emerging experimental and computational methods.

Authors:  Emily K Makowski; Lina Wu; Priyanka Gupta; Peter M Tessier
Journal:  MAbs       Date:  2021 Jan-Dec       Impact factor: 5.857

  6 in total

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