Literature DB >> 32377032

BiMM tree: A decision tree method for modeling clustered and longitudinal binary outcomes.

Jaime Lynn Speiser1, Bethany J Wolf2, Dongjun Chung2, Constantine J Karvellas3, David G Koch4, Valerie L Durkalski2.   

Abstract

Clustered binary outcomes are frequently encountered in clinical research (e.g. longitudinal studies). Generalized linear mixed models (GLMMs) for clustered endpoints have challenges for some scenarios (e.g. data with multi-way interactions and nonlinear predictors unknown a priori). We develop an alternative, data-driven method called Binary Mixed Model (BiMM) tree, which combines decision tree and GLMM within a unified framework. Simulation studies show that BiMM tree achieves slightly higher or similar accuracy compared to standard methods. The method is applied to a real dataset from the Acute Liver Failure Study Group.

Entities:  

Keywords:  classification and regression tree; clustered data; decision tree; longitudinal data; mixed effects

Year:  2018        PMID: 32377032      PMCID: PMC7202553          DOI: 10.1080/03610918.2018.1490429

Source DB:  PubMed          Journal:  Commun Stat Simul Comput        ISSN: 0361-0918            Impact factor:   1.118


  9 in total

1.  Binary partitioning for continuous longitudinal data: categorizing a prognostic variable.

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Journal:  Stat Med       Date:  2002-11-30       Impact factor: 2.373

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Review 4.  The importance of immune dysfunction in determining outcome in acute liver failure.

Authors:  Charalambos Gustav Antoniades; Philip A Berry; Julia A Wendon; Diego Vergani
Journal:  J Hepatol       Date:  2008-08-21       Impact factor: 25.083

5.  Comments on Fifty Years of Classification and Regression Trees.

Authors:  Chi Song; Heping Zhang
Journal:  Int Stat Rev       Date:  2014-12-01       Impact factor: 2.217

6.  Model for end-stage liver disease (MELD) and allocation of donor livers.

Authors:  Russell Wiesner; Erick Edwards; Richard Freeman; Ann Harper; Ray Kim; Patrick Kamath; Walter Kremers; John Lake; Todd Howard; Robert M Merion; Robert A Wolfe; Ruud Krom
Journal:  Gastroenterology       Date:  2003-01       Impact factor: 22.682

7.  Early indicators of prognosis in fulminant hepatic failure.

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8.  Intensive care of patients with acute liver failure: recommendations of the U.S. Acute Liver Failure Study Group.

Authors:  R Todd Stravitz; Andreas H Kramer; Timothy Davern; A Obaid S Shaikh; Stephen H Caldwell; Ravindra L Mehta; Andres T Blei; Robert J Fontana; Brendan M McGuire; Lorenzo Rossaro; Alastair D Smith; William M Lee
Journal:  Crit Care Med       Date:  2007-11       Impact factor: 7.598

9.  Acute liver failure: Summary of a workshop.

Authors:  William M Lee; Robert H Squires; Scott L Nyberg; Edward Doo; Jay H Hoofnagle
Journal:  Hepatology       Date:  2008-04       Impact factor: 17.425

  9 in total
  2 in total

1.  Machine learning and design of experiments with an application to product innovation in the chemical industry.

Authors:  Rosa Arboretti; Riccardo Ceccato; Luca Pegoraro; Luigi Salmaso; Chris Housmekerides; Luca Spadoni; Elisabetta Pierangelo; Sara Quaggia; Catherine Tveit; Sebastiano Vianello
Journal:  J Appl Stat       Date:  2021-03-26       Impact factor: 1.416

2.  A random forest method with feature selection for developing medical prediction models with clustered and longitudinal data.

Authors:  Jaime Lynn Speiser
Journal:  J Biomed Inform       Date:  2021-03-26       Impact factor: 6.317

  2 in total

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