Literature DB >> 32375940

Devosia marina sp. nov., isolated from deep seawater of the South China Sea, and reclassification of Devosia subaequoris as a later heterotypic synonym of Devosia soli.

Yang Liu1, Juan Du1, Jun Zhang1, Qiliang Lai2, Zongze Shao2, Honghui Zhu1.   

Abstract

A Gram-stain-negative, aerobic, rod-shaped and motile bacterial strain, designated L53-10-65T, was isolated from deep seawater of the South China Sea. Strain L53-10-65T was found to grow at 4-41 °C (optimum, 28 °C), at pH 5.0-9.0 (pH 7.0-8.0) and in 0-7 % (w/v) NaCl (2 %). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain L53-10-65T fell within the genus Devosia, with the highest similarity to Devosia indica IO390501T (98.4 %), followed by 'Devosia lucknowensis' L15T (97.7 %) and Devosia riboflavina IFO 13584T (96.8 %). The digital DNA-DNA hybridization (dDDH) values between strain L53-10-65T and the three relatives above were 43.7, 21.5 and 20.9 %, respectively; the average nucleotide identity (ANI) values were 91.3, 78.4 and 76.8 %, respectively. These values were below the 70 % dDDH and 95-96 % ANI thresholds for bacterial species delineation. The major cellular fatty acids of strain L53-10-65T were summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c), C18 : 1 ω7c 11-methyl and C16 : 0. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and glycolipids. The respiratory quinone was identified as Q-10. The DNA G+C content of strain L53-10-65T was 61.3 mol%. Based on the results of phylogenetic analysis and distinctive phenotypic characteristics, strain L53-10-65T is concluded to represent a novel species of the genus Devosia, for which the name Devosia marina sp. nov. is proposed. The type strain of the species is L53-10-65T (=MCCC 1A05139T=KCTC 72888T). Moreover, we propose that Devosia subaequoris is a later heterotypic synonym of Devosia soli based on the present results.

Entities:  

Keywords:  Devosia marina; genotypes and phenotypes; later heterotypic synonym; polyphasic taxonomy

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Year:  2020        PMID: 32375940     DOI: 10.1099/ijsem.0.004130

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Qipengyuania soli sp. nov., Isolated from Mangrove Soil.

Authors:  Yang Liu; Tao Pei; Ming-Rong Deng; Honghui Zhu
Journal:  Curr Microbiol       Date:  2021-05-28       Impact factor: 2.188

2.  Ruegeria alba sp. nov., Isolated from a Tidal Flat Sediment.

Authors:  Juan Du; Yang Liu; Tao Pei; Anzhang Li; Honghui Zhu
Journal:  Curr Microbiol       Date:  2022-07-26       Impact factor: 2.343

3.  Comparative genome characterization of Echinicola marina sp. nov., isolated from deep-sea sediment provide insight into carotenoid biosynthetic gene cluster evolution.

Authors:  Yu Pang; Mengru Chen; Wei Lu; Ming Chen; Yongliang Yan; Min Lin; Wei Zhang; Zhengfu Zhou
Journal:  Sci Rep       Date:  2021-12-17       Impact factor: 4.379

  3 in total

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