Literature DB >> 32374767

2.7 Å cryo-EM structure of vitrified M. musculus H-chain apoferritin from a compact 200 keV cryo-microscope.

Farzad Hamdi1, Christian Tüting1, Dmitry A Semchonok1, Koen M Visscher2, Fotis L Kyrilis1, Annette Meister1,3, Ioannis Skalidis1, Lisa Schmidt1, Christoph Parthier3, Milton T Stubbs1,3, Panagiotis L Kastritis1,3,4.   

Abstract

Here we present the structure of mouse H-chain apoferritin at 2.7 Å (FSC = 0.143) solved by single particle cryogenic electron microscopy (cryo-EM) using a 200 kV device, the Thermo Fisher Glacios®. This is a compact, two-lens illumination system with a constant power objective lens, without any energy filters or aberration correctors, often thought of as a "screening cryo-microscope". Coulomb potential maps reveal clear densities for main chain carbonyl oxygens, residue side chains (including alternative conformations) and bound solvent molecules. We used a quasi-crystallographic reciprocal space approach to fit model coordinates to the experimental cryo-EM map. We argue that the advantages offered by (a) the high electronic and mechanical stability of the microscope, (b) the high emission stability and low beam energy spread of the high brightness Field Emission Gun (X-FEG), (c) direct electron detection technology and (d) particle-based Contrast Transfer Function (CTF) refinement have contributed to achieving high resolution. Overall, we show that basic electron optical settings for automated cryo-electron microscopy imaging can be used to determine structures approaching atomic resolution.

Entities:  

Year:  2020        PMID: 32374767     DOI: 10.1371/journal.pone.0232540

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  4 in total

Review 1.  Present and Emerging Methodologies in Cryo-EM Single-Particle Analysis.

Authors:  Mengyu Wu; Gabriel C Lander
Journal:  Biophys J       Date:  2020-09-01       Impact factor: 4.033

2.  Insights into the bilayer-mediated toppling mechanism of a folate-specific ECF transporter by cryo-EM.

Authors:  Chancievan Thangaratnarajah; Jan Rheinberger; Cristina Paulino; Dirk J Slotboom
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-24       Impact factor: 11.205

3.  High-speed high-resolution data collection on a 200 keV cryo-TEM.

Authors:  Jared V Peck; Jonathan F Fay; Joshua D Strauss
Journal:  IUCrJ       Date:  2022-01-29       Impact factor: 4.769

Review 4.  Cryo-electron tomography related radiation-damage parameters for individual-molecule 3D structure determination.

Authors:  Han Xue; Meng Zhang; Jianfang Liu; Jianjun Wang; Gang Ren
Journal:  Front Chem       Date:  2022-08-30       Impact factor: 5.545

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.