Literature DB >> 32369593

Gene regulatory networks controlled by FLOWERING LOCUS C that confer variation in seasonal flowering and life history.

Eva Madrid1, John W Chandler1, George Coupland1.   

Abstract

Responses to environmental cues synchronize reproduction of higher plants to the changing seasons. The genetic basis of these responses has been intensively studied in the Brassicaceae. The MADS-domain transcription factor FLOWERING LOCUS C (FLC) plays a central role in the regulatory network that controls flowering of Arabidopsis thaliana in response to seasonal cues. FLC blocks flowering until its transcription is stably repressed by extended exposure to low temperatures in autumn or winter and, therefore, FLC activity is assumed to limit flowering to spring. Recent reviews describe the complex epigenetic mechanisms responsible for FLC repression in cold. We focus on the gene regulatory networks controlled by FLC and how they influence floral transition. Genome-wide approaches determined the in vivo target genes of FLC and identified those whose transcription changes during vernalization or in flc mutants. We describe how studying FLC targets such as FLOWERING LOCUS T, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15, and TARGET OF FLC AND SVP 1 can explain different flowering behaviours in response to vernalization and other environmental cues, and help define mechanisms by which FLC represses gene transcription. Elucidating the gene regulatory networks controlled by FLC provides access to the developmental and physiological mechanisms that regulate floral transition.
© The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Entities:  

Keywords:  zzm321990 FTzzm321990 ; zzm321990 SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15zzm321990 ; zzm321990 SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1zzm321990 ; FLOWERING LOCUS C; Floral transition; MADS-domain; vernalization

Year:  2021        PMID: 32369593      PMCID: PMC7816851          DOI: 10.1093/jxb/eraa216

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  104 in total

1.  Activation tagging of the floral inducer FT.

Authors:  I Kardailsky; V K Shukla; J H Ahn; N Dagenais; S K Christensen; J T Nguyen; J Chory; M J Harrison; D Weigel
Journal:  Science       Date:  1999-12-03       Impact factor: 47.728

2.  The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex.

Authors:  Chris A Helliwell; Craig C Wood; Masumi Robertson; W James Peacock; Elizabeth S Dennis
Journal:  Plant J       Date:  2006-04       Impact factor: 6.417

Review 3.  The FLC Locus: A Platform for Discoveries in Epigenetics and Adaptation.

Authors:  Charles Whittaker; Caroline Dean
Journal:  Annu Rev Cell Dev Biol       Date:  2017-07-10       Impact factor: 13.827

4.  FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering.

Authors:  S D Michaels; R M Amasino
Journal:  Plant Cell       Date:  1999-05       Impact factor: 11.277

5.  GA4 is the active gibberellin in the regulation of LEAFY transcription and Arabidopsis floral initiation.

Authors:  Sven Eriksson; Henrik Böhlenius; Thomas Moritz; Ove Nilsson
Journal:  Plant Cell       Date:  2006-08-18       Impact factor: 11.277

6.  Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes.

Authors:  Milo J Aukerman; Hajime Sakai
Journal:  Plant Cell       Date:  2003-10-10       Impact factor: 11.277

7.  EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development.

Authors:  Sang Yeol Kim; Jungeun Lee; Leor Eshed-Williams; Daniel Zilberman; Z Renee Sung
Journal:  PLoS Genet       Date:  2012-03-22       Impact factor: 5.917

8.  Combinatorial activities of SHORT VEGETATIVE PHASE and FLOWERING LOCUS C define distinct modes of flowering regulation in Arabidopsis.

Authors:  Julieta L Mateos; Pedro Madrigal; Kenichi Tsuda; Vimal Rawat; René Richter; Maida Romera-Branchat; Fabio Fornara; Korbinian Schneeberger; Paweł Krajewski; George Coupland
Journal:  Genome Biol       Date:  2015-02-11       Impact factor: 13.583

9.  Antagonistic roles for H3K36me3 and H3K27me3 in the cold-induced epigenetic switch at Arabidopsis FLC.

Authors:  Hongchun Yang; Martin Howard; Caroline Dean
Journal:  Curr Biol       Date:  2014-07-24       Impact factor: 10.834

10.  The vernalisation regulator FLOWERING LOCUS C is differentially expressed in biennial and annual Brassica napus.

Authors:  Sarah V Schiessl; Daniela Quezada-Martinez; Ellen Tebartz; Rod J Snowdon; Lunwen Qian
Journal:  Sci Rep       Date:  2019-10-17       Impact factor: 4.379

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  9 in total

1.  Synthetic memory circuits for stable cell reprogramming in plants.

Authors:  James P B Lloyd; Florence Ly; Patrick Gong; Jahnvi Pflueger; Tessa Swain; Christian Pflueger; Elliott Fourie; Muhammad Adil Khan; Brendan N Kidd; Ryan Lister
Journal:  Nat Biotechnol       Date:  2022-07-04       Impact factor: 68.164

2.  iRegNet: an integrative Regulatory Network analysis tool for Arabidopsis thaliana.

Authors:  Sangrea Shim; Chung-Mo Park; Pil Joon Seo
Journal:  Plant Physiol       Date:  2021-11-03       Impact factor: 8.005

3.  Identification and Characterization of the MIKC-Type MADS-Box Gene Family in Brassica napus and Its Role in Floral Transition.

Authors:  Enqiang Zhou; Yin Zhang; Huadong Wang; Zhibo Jia; Xuejun Wang; Jing Wen; Jinxiong Shen; Tingdong Fu; Bin Yi
Journal:  Int J Mol Sci       Date:  2022-04-13       Impact factor: 6.208

4.  Genome-Wide Analyses of MADS-Box Genes in Humulus lupulus L. Reveal Potential Participation in Plant Development, Floral Architecture, and Lupulin Gland Metabolism.

Authors:  Robert Márquez Gutiérrez; Thales Henrique Cherubino Ribeiro; Raphael Ricon de Oliveira; Vagner Augusto Benedito; Antonio Chalfun-Junior
Journal:  Plants (Basel)       Date:  2022-05-03

Review 5.  The control of polycomb repressive complexes by long noncoding RNAs.

Authors:  Jackson B Trotman; Keean C A Braceros; Rachel E Cherney; McKenzie M Murvin; J Mauro Calabrese
Journal:  Wiley Interdiscip Rev RNA       Date:  2021-04-16       Impact factor: 9.957

6.  Genetic encoding of complex traits.

Authors:  Stanislav Kopriva; Andreas P M Weber
Journal:  J Exp Bot       Date:  2021-01-20       Impact factor: 6.992

7.  The flowering transition pathways converge into a complex gene regulatory network that underlies the phase changes of the shoot apical meristem in Arabidopsis thaliana.

Authors:  Elva C Chávez-Hernández; Stella Quiroz; Berenice García-Ponce; Elena R Álvarez-Buylla
Journal:  Front Plant Sci       Date:  2022-08-09       Impact factor: 6.627

Review 8.  Mechanisms of Vernalization-Induced Flowering in Legumes.

Authors:  Svetlana Yu Surkova; Maria G Samsonova
Journal:  Int J Mol Sci       Date:  2022-08-31       Impact factor: 6.208

9.  The ATXN2 Orthologs CID3 and CID4, Act Redundantly to In-Fluence Developmental Pathways throughout the Life Cycle of Arabidopsis thaliana.

Authors:  Zaira M López-Juárez; Laura Aguilar-Henonin; Plinio Guzmán
Journal:  Int J Mol Sci       Date:  2021-03-17       Impact factor: 5.923

  9 in total

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