| Literature DB >> 32366311 |
Qing Sun1, Junli Liu2, Guanghui Cheng1, Mingkai Dai1, Jiaxi Liu1, Zhenqiang Qi3, Jingjie Zhao2, Wei Li4, Feng Kong5, Gang Liu6, Magnus Björkholm7, Dawei Xu8.
Abstract
BACKGROUND: Primary glomerulonephritis (GN) is the leading cause of chronic kidney disease (CKD) and frequently progresses into end stage renal diseases (ESRDs). Shorter leukocyte telomere length (LTL) has been implicated in the CKD susceptibility and diminished kidney function, however, it is unclear whether the variants in telomerase genes contribute to risk to GN/CKD/ESRD. Here we address this issue by determining their association with the genetic variants of rs12696304 at the telomerase RNA component (TERC) and rs2736100 at the telomerase reverse transcriptase (TERT) loci.Entities:
Keywords: CKD; Genotypes; Glomerulonephritis; Single nucleotide polymorphism; Telomerase; Telomere
Mesh:
Substances:
Year: 2020 PMID: 32366311 PMCID: PMC7199377 DOI: 10.1186/s12967-020-02347-3
Source DB: PubMed Journal: J Transl Med ISSN: 1479-5876 Impact factor: 5.531
Characteristics of primary GN/CKD/ESRD patients & healthy controls
| Primary GN | Healthy controls | ||
|---|---|---|---|
| CKD (non-end stage) | ESRDs | ||
| Number | 243 | 526 | 515 |
| Age (year) | |||
| Range | 13–81 | 15–83 | 15–86 |
| Mean ± SD | 43 ± 14 | 46 ± 11 | 46 ± 12 |
| Gender | |||
| Male | 133 | 301 | 289 |
| Female | 110 | 225 | 226 |
GN Glomerulonephritis, CKD chronic kidney disease, ESRD end-stage renal disease
Genotyping results of rs12696304 and rs2736100 in controls and patients with GN/CKD/ESRD
| Controls (M + F) | Patients | Odds ratio | Controls (M only) | Patients | Odds ratio | Controls | Patients | Odds ratio | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs12696304 (N) | 515 (100%) | 759 (100%) | 289 (100%) | 434 (100%) | 226(100%) | 326(100%) | ||||||
| CC | 56 (10.9) | 64 (8.4) | 1.0 (ref.) | 32 (11.1) | 40 (9.2) | 1.0 (ref.) | 24 (10.6) | 24 (7.4) | 1.0 (ref.) | |||
| GC | 223 (43.3) | 275 (36.2) | 1.079 (0.723–1.609) | 0.709 | 119 (41.2) | 157 (36.3) | 1.055 (0.626–1.779) | 0.840 | 104 (46.0) | 118 (36.2) | 1.135 (0.608–2.118) | 0.692 |
| GG | 236 (45.8) | 420 (55.4) | 1.557 (1.052–2.306) | 138 (47.7) | 236 (54.5) | 1.368 (0.821–2.279) | 0.227 | 98 (43.4) | 184 (56.4) | 1.878 (1.013–3.478) | ||
| CC + GC | 279 (54.2) | 339 (44.6) | 1.0 (ref.) | 151 (52.3) | 197 (45.5) | 1.0 (ref.) | 128 (56.6) | 142 (43.6) | 1.0 (ref.) | |||
| GG | 236 (45.8) | 420 (55.4) | 1.465 (1.170–1.834) | 138 (47.7) | 236 (54.5) | 1.311 (0.973–1.767) | 0.089 | 98 (43.4) | 184 (56.4) | 1.692 (1.202–2.383) | ||
| C | 335 (32.5) | 403 (26.5) | 1.0 (ref.) | 183 (31.7) | 237 (27.4) | 1.0 (ref.) | 152 (33.6) | 166 (25.5) | 1.0 (ref.) | |||
| G | 695 (67.5) | 1115 (73.5) | 1.334 (1.122–1.586) | 395 (68.3) | 629 (72.6) | 1.230 (0.977–1.548) | 0.078 | 300 (66.4) | 486 (74.5) | 1.483 (1.140–1.929) | ||
| rs2736100 (N) | 515 (100%) | 757 (100%) | 289 (100%) | 426 (100%) | 226 (100%) | 331 (100%) | ||||||
| AA | 158 (30.7) | 222 (29.3) | 1.0 (ref.) | 93 (32.2) | 138 (32.4) | 1.0 (ref.) | 65 (28.8) | 84 (25.4) | 1.0 (ref.) | |||
| AC | 257 (49.9) | 364 (48.1) | 1.008 (0.778–1.306) | 0.952 | 136 (47.1) | 201 (47.2) | 0.996 (0.708–1.401) | 0.982 | 121 (53.5) | 163 (49.2) | 1.042 (0.699–1.555) | |
| CC | 100 (19.4) | 171 (22.6) | 1.217 (0.884–1.676) | 0.229 | 60 (20.7) | 87 (20.4) | 0.977 (0.641–1.489) | 0.914 | 40 (17.7) | 84 (25.4) | 1.625 (0.989–2.670) | |
| A | 573 (55.6) | 808 (53.4) | 1.0 (ref.) | 322 (55.7) | 477 (56.0) | 1.0 (ref.) | 251 (55.5) | 331 (50.0) | 1.0 (ref.) | |||
| C | 457 (44.4) | 706 (46.6) | 1.098 (0.934–1.284) | 0.261 | 256 (44.3) | 375 (44.0) | 0.989 (0.799–1.223) | 0.918 | 201 (44.5) | 331 (50.0) | 1.249 (0.982–1.588) |
GN Glomerulonephritis, CKD chronic kidney disease, ESRD end-stage renal disease, M male, F female, CI confidence interval; italic P value: statistically significant
The association of rs12696304 variants with primary GN/CKD risk
| Controls | Patients | Odds ratio | Controls | Patients | Odds ratio | Controls | Patients | Odds ratio | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs12696304(N) | 515 (100%) | 243 (100%) | 289 (100%) | 133 (100%) | 226(100%) | 110(100%) | ||||||
| CC | 56 (10.9) | 13 (5.3) | 1.0 (ref.) | 32 (11.1) | 9 (6.7) | 1.0 (ref.) | 24 (10.6) | 4 (3.6) | 1.0 (ref.) | |||
| GC | 223 (43.3) | 89 (36.6) | 1.719 (0.896–3.298) | 0.135 | 119 (41.2) | 49 (36.8) | 1.464 (0.651–3.294) | 0.465 | 104 (46.0) | 40 (36.4) | 2.308 (0.753–7.070) | 0.207 |
| GG | 236 (45.8) | 141 (58.1) | 2.574 (1.359–4.873) | 138 (47.7) | 75 (56.5) | 1.932 (0.876–4.263) | 0.141 | 98 (43.4) | 66 (60.0) | 4.041(1.340–12.181) | ||
| CC + GC | 279 (54.2) | 102 (41.9) | 1.0 (ref.) | 151 (52.3) | 58 (43.5) | 1.0 (ref.) | 128 (56.6) | 44 (40.0) | 1.0 (ref.) | |||
| GG | 236 (45.8) | 141 (58.1) | 1.634 (1.201–2.234) | 138 (47.7) | 75 (56.5) | 1.415 (0.936–2.139) | 0.122 | 98 (43.4) | 66 (60.0) | 1.959 (1.233–3.114) | ||
| C | 335 (32.5) | 115 (23.7) | 183 (31.7) | 67 (25.2) | 1.0 (ref.) | 152 (33.6) | 48 | 1.0 (ref.) | ||||
| G | 695 (67.5) | 371 (76.3) | 1.555 (1.215–1.990) | 395 (68.3) | 199 (74.8) | 1.376 (0.992–1.910) | 0.067 | 300 (66.4) | 172 | 1.816 (1.248–2.641) | ||
| rs2736100 (N) | 515 (100%) | 237 (100%) | 289 (100%) | 129 (100%) | 226 (100%) | 108 (100%) | ||||||
| AA | 158 (30.7) | 66 (27.9) | 1.0 (ref.) | 93 (32.2) | 34 (26.4) | 1.0 (ref.) | 65 (28.8) | 32 (29.6) | 1.0 (ref.) | |||
| AC | 257 (49.9) | 116 (48.9) | 1.081 (0.753–1.551) | 0.743 | 136 (47.1) | 67 (51.9) | 1.348 (0.826–2.199) | 0.283 | 121 (53.5) | 49 (45.4) | 0.823 (0.481–1.409) | 0.566 |
| CC | 100 (19.4) | 55 (23.2) | 1.317 (0.851–2.038) | 0.261 | 60 (20.7) | 28 (21.7) | 1.276 (0.703–2.317) | 0.516 | 40 (17.7) | 27 (25.0) | 1.371 (0.719–2.616) | 0.428 |
| A | 573 (55.6) | 248 (52.3) | 1.0 (ref.) | 322(55.7) | 135 (52.3) | 1.0 (ref.) | 251(55.5) | 113 (52.3) | 1.0 (ref.) | |||
| C | 457 (44.4) | 226 (47.7) | 1.143 (0.919–1.421) | 0.253 | 256(44.3) | 123 (47.7) | 1.146 (0.854–1.538) | 0.405 | 201(44.5) | 103 (47.7) | 1.138 (0.822–1.576) | 0.485 |
GN Glomerulonephritis, CKD chronic kidney disease, M male, F female, CI confidence interval; italic P value: statistically significant
Differences in rs12696304 and rs2736100 genotyping between controls and patients with ESRD
| Patients | Odds ratio | Controls | Patients | Odds ratio | Controls | Patients | Odds ratio | |||
|---|---|---|---|---|---|---|---|---|---|---|
| 516 (100%) | 289 (100%) | 300 (100%) | 226 (100%) | 216 (100%) | ||||||
| 51 (9.9) | 1.0 (ref.) | 32 (11.1) | 31 (10.3) | 1.0 (ref.) | 24 (10.6) | 20 (9.3) | 1.0 (ref.) | |||
| 186 (36.0) | 0.916 (0.598–1.403) | 0.686 | 119 (41.2) | 108 (36.0) | 0.937 (0.536–1.637) | 0.819 | 104 (46.0) | 78 (36.1) | 0.900(0.464–1.745) | 0.755 |
| 279 (54.1) | 1.298 (0.855–1.970) | 0.219 | 138 (47.7) | 161 (53.7) | 1.204 (0.699–2.074) | 0.502 | 98 (43.4) | 118 (54.6) | 1.445 (0.753–2.771) | 0.266 |
| 237 (45.9) | 1.0 (ref.) | 151 (52.3) | 139 (46.3) | 1.0 (ref.) | 128 (56.6) | 98 (45.4) | 1.0 (ref.) | |||
| 279 (54.1) | 1.392 (1.089–1.778) | 138 (47.7) | 161 (53.7) | 1.267 (0.917–1.752) | 0.176 | 98 (43.4) | 118 (54.6) | 1.573 (1.080–2.289) | ||
| 288 (27.9) | 1.0 (ref.) | 183 (31.7) | 170 (28.3) | 1.0 (ref.) | 152 (33.6) | 118 (27.3) | 1.0 (ref.) | |||
| 744 (72.1) | 1.245 (1.031–1.503) | 395 (68.3) | 430 (71.7) | 1.172 (0.913–1.504) | 0.213 | 300 (66.4) | 314 (72.7) | 1.348 (1.011–1.798) | ||
| 520 (100%) | 289 (100%) | 297 (100%) | 226 (100%) | 223 (100%) | ||||||
| 156 (30.0) | 1.0 (ref.) | 93 (32.2) | 104 (35.0) | 1.0 (ref.) | 65 (28.8) | 52 (23.3) | 1.0 (ref.) | |||
| 248 (47.7) | 0.977 (0.737–1.295) | 0.873 | 136 (47.1) | 134 (45.1) | 0.881 (0.610–1.273) | 0.500 | 121 (53.5) | 114 (51.1) | 1.178 (0.754–1.839) | 0.472 |
| 116 (22.3) | 1.175 (0.830–1.662) | 0.363 | 60 (20.7) | 59 (19.9) | 0.879 (0.558–1.387) | 0.580 | 40 (17.7) | 57 (25.6) | 1.781 (1.033–3.070) | |
| 560 (53.8) | 1.0 (ref.) | 322 (55.7) | 342 (57.6) | 1.0 (ref.) | 251 (55.5) | 218 (48.9) | 1.0 (ref.) | |||
| 480 (46.2) | 1.075 (0.904–1.278) | 0.415 | 256 (44.3) | 252 (42.4) | 0.927 (0.736–1.168) | 0.519 | 201 (44.5) | 228 (51.1) | 1.306 (1.005–1.698) |
ESRD End-stage renal disease, M male, F female, CI confidence interval; italic P value: statistically significant
Fig. 1Leukocyte telomere length (LTL) in controls and patients with GN/CKD/ESRD. LTL was assessed using qPCR as described in Methods. a The negative correlation between LTL and age in both controls and patients. b No differences in LTL between controls and patients. Left: All controls and patients; Middle and right: Male and female controls and patients, respectively. c No differences in LTL among different genotypes of rs12696304 in controls (left) and patients (right). d Lack of differences in LTL among different genotypes of rs2736100 in controls (left) and patients (right). e Lack of association of LTL with rs12696304 CC or GG genotypes between controls and patients. Left and right panels: CC and GG genotypes, respectively