Literature DB >> 32365176

Structural insight into DNA joining: from conserved mechanisms to diverse scaffolds.

Adele Williamson1,2, Hanna-Kirsti S Leiros1.   

Abstract

DNA ligases are diverse enzymes with essential functions in replication and repair of DNA; here we review recent advances in their structure and distribution and discuss how this contributes to understanding their biological roles and technological potential. Recent high-resolution crystal structures of DNA ligases from different organisms, including DNA-bound states and reaction intermediates, have provided considerable insight into their enzymatic mechanism and substrate interactions. All cellular organisms possess at least one DNA ligase, but many species encode multiple forms some of which are modular multifunctional enzymes. New experimental evidence for participation of DNA ligases in pathways with additional DNA modifying enzymes is defining their participation in non-redundant repair processes enabling elucidation of their biological functions. Coupled with identification of a wealth of DNA ligase sequences through genomic data, our increased appreciation of the structural diversity and phylogenetic distribution of DNA ligases has the potential to uncover new biotechnological tools and provide new treatment options for bacterial pathogens.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

Entities:  

Year:  2020        PMID: 32365176     DOI: 10.1093/nar/gkaa307

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  5 in total

1.  Non-Equilibrium Living Polymers.

Authors:  Davide Michieletto
Journal:  Entropy (Basel)       Date:  2020-10-06       Impact factor: 2.524

2.  High-fidelity DNA ligation enforces accurate Okazaki fragment maturation during DNA replication.

Authors:  Jessica S Williams; Percy P Tumbale; Mercedes E Arana; Julian A Rana; R Scott Williams; Thomas A Kunkel
Journal:  Nat Commun       Date:  2021-01-20       Impact factor: 14.919

3.  Bacteriophage origin of some minimal ATP-dependent DNA ligases: a new structure from Burkholderia pseudomallei with striking similarity to Chlorella virus ligase.

Authors:  Jolyn Pan; Kjersti Lian; Aili Sarre; Hanna-Kirsti S Leiros; Adele Williamson
Journal:  Sci Rep       Date:  2021-09-21       Impact factor: 4.379

4.  Mismatch discrimination and sequence bias during end-joining by DNA ligases.

Authors:  Katharina Bilotti; Vladimir Potapov; John M Pryor; Alexander T Duckworth; James L Keck; Gregory J S Lohman
Journal:  Nucleic Acids Res       Date:  2022-05-06       Impact factor: 19.160

5.  Insight into the sequence-specific elements leading to increased DNA bending and ligase-mediated circularization propensity by antitumor trabectedin.

Authors:  Alberto Mills; Federico Gago
Journal:  J Comput Aided Mol Des       Date:  2021-06-09       Impact factor: 3.686

  5 in total

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