Literature DB >> 32360639

Exploring the structure and dynamics of macromolecular complexes by native mass spectrometry.

Elisabetta Boeri Erba1, Luca Signor2, Carlo Petosa2.   

Abstract

Mass spectrometry (MS) is an effective approach for determining the mass of biomolecules with high accuracy, sensitivity and speed. Over the past 25 years, MS performed under non-denaturing conditions ("native MS") has been successfully exploited to investigate non-covalently associated biomolecules. Here we illustrate native MS applications aimed at studying protein-ligand interactions and structures of biomolecular assemblies, including both soluble and membrane protein complexes. Moreover, we review how the partial dissociation of holo-complexes can be used to determine the stoichiometry of subunits and their topology. We also describe "native top-down MS", an approach based on Fourier Transform MS (FT MS), whereby non-covalent interactions are preserved while covalent bonds are selectively fragmented. Overall, native MS plays an increasingly important role in integrative structural biology, helping researchers to elucidate the three dimensional architecture of intricate macromolecular complexes.
Copyright © 2020 Elsevier B.V. All rights reserved.

Keywords:  2D interaction map; Integrative structural biology; Macromolecular complexes; Native mass spectrometry (MS); Native top-down MS; Protein-ligand interactions; Stoichiometry

Mesh:

Substances:

Year:  2020        PMID: 32360639     DOI: 10.1016/j.jprot.2020.103799

Source DB:  PubMed          Journal:  J Proteomics        ISSN: 1874-3919            Impact factor:   4.044


  11 in total

1.  Characterization of a Salmonella Transcription Factor-DNA Complex and Identification of the Inducer by Native Mass Spectrometry.

Authors:  Blake E Szkoda; Angela Di Capua; Joy Shaffer; Edward J Behrman; Vicki H Wysocki; Venkat Gopalan
Journal:  J Mol Biol       Date:  2022-02-14       Impact factor: 5.469

2.  Symmetry of 4-Oxalocrotonate Tautomerase Trimers Influences Unfolding and Fragmentation in the Gas Phase.

Authors:  Sarah N Sipe; Emily B Lancaster; Jamie P Butalewicz; Christian P Whitman; Jennifer S Brodbelt
Journal:  J Am Chem Soc       Date:  2022-06-29       Impact factor: 16.383

Review 3.  Surface-induced Dissociation Mass Spectrometry as a Structural Biology Tool.

Authors:  Dalton T Snyder; Sophie R Harvey; Vicki H Wysocki
Journal:  Chem Rev       Date:  2021-11-02       Impact factor: 72.087

Review 4.  Native Mass Spectrometry of Membrane Proteins.

Authors:  James E Keener; Guozhi Zhang; Michael T Marty
Journal:  Anal Chem       Date:  2020-10-28       Impact factor: 6.986

Review 5.  Scattering-based Light Microscopy: From Metal Nanoparticles to Single Proteins.

Authors:  Lee Priest; Jack S Peters; Philipp Kukura
Journal:  Chem Rev       Date:  2021-09-29       Impact factor: 60.622

Review 6.  Approaches to Heterogeneity in Native Mass Spectrometry.

Authors:  Amber D Rolland; James S Prell
Journal:  Chem Rev       Date:  2021-09-01       Impact factor: 72.087

7.  Native mass spectrometry and gas-phase fragmentation provide rapid and in-depth topological characterization of a PROTAC ternary complex.

Authors:  Jong Hee Song; Nicole D Wagner; Jing Yan; Jing Li; Richard Y-C Huang; Aaron J Balog; John A Newitt; Guodong Chen; Michael L Gross
Journal:  Cell Chem Biol       Date:  2021-06-02       Impact factor: 9.039

8.  The Plastid-Encoded RNA Polymerase-Associated Protein PAP9 Is a Superoxide Dismutase With Unusual Structural Features.

Authors:  Adrien Favier; Pierre Gans; Elisabetta Boeri Erba; Luca Signor; Soumiya Sankari Muthukumar; Thomas Pfannschmidt; Robert Blanvillain; David Cobessi
Journal:  Front Plant Sci       Date:  2021-06-30       Impact factor: 5.753

Review 9.  Insight to Functional Conformation and Noncovalent Interactions of Protein-Protein Assembly Using MALDI Mass Spectrometry.

Authors:  Marco Giampà; Elvira Sgobba
Journal:  Molecules       Date:  2020-10-28       Impact factor: 4.411

10.  Native mass spectrometry analyses of chaperonin complex TRiC/CCT reveal subunit N-terminal processing and re-association patterns.

Authors:  Miranda P Collier; Karen Betancourt Moreira; Kathy H Li; Yu-Chan Chen; Daniel Itzhak; Rahul Samant; Alexander Leitner; Alma Burlingame; Judith Frydman
Journal:  Sci Rep       Date:  2021-06-22       Impact factor: 4.379

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