Literature DB >> 32360412

Screening and evaluation of the stability of expression of reference genes in Lymantria dispar (Lepidoptera: Erebidae) using qRT-PCR.

Jingjing Yin1, Lili Sun1, Qihui Zhang1, Chuanwang Cao2.   

Abstract

The quantitative real-time polymerase chain reaction (qRT-PCR) has rapidly become the most sensitive and accurate method for the quantitative analysis of gene expression. Normalization of gene expression to that of relatively stably expressed housekeeping genes is required to facilitate the study of gene expression and to obtain more accurate RT-PCR data. However, no studies of the stability of expression of housekeeping genes in Lymantria dispar have been reported. In the present study, BestKeeper, GeNorm and NormFinder statistical software was used to evaluate the expression of thirteen candidate reference genes in L. dispar under different conditions. The expression levels of candidate reference genes were determined for two biological factors (developmental stages and tissues) and four abiotic treatments (temperature, insecticide, CO2 and starvation). The results showed that the best candidate reference genes in L. dispar were TUB, AK, RPS15 for developmental stages, RPL32 and GAPDH for tissues, ACTB and EF1-α for CO2 stress, GAPDH and RPL32 for temperature stress, RPS3 and GAPDH for insecticide stress, and GAPDH and RPS3 for starvation stress. In summary, EF1-α and TUB are preferential housekeeping genes in L. dispar under various conditions. These results provide a basis for the further study of functional genes of L. dispar.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Expression stability; Housekeeping gene; Lymantria dispar; qRT-PCR

Year:  2020        PMID: 32360412     DOI: 10.1016/j.gene.2020.144712

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  7 in total

1.  Screening Potential Reference Genes in Tuta absoluta with Real-Time Quantitative PCR Analysis under Different Experimental Conditions.

Authors:  An-Pei Yang; Yu-Sheng Wang; Cong Huang; Zhi-Chuang Lv; Wan-Xue Liu; Si-Yan Bi; Fang-Hao Wan; Qiang Wu; Gui-Fen Zhang
Journal:  Genes (Basel)       Date:  2021-08-17       Impact factor: 4.096

2.  Identification of suitable reference genes for expression profiling studies using qRT-PCR in an important insect pest, Maruca vitrata.

Authors:  Aparajita Choudhury; Shubham Verma; Mehanathan Muthamilarasan; Manchikatla Venkat Rajam
Journal:  Mol Biol Rep       Date:  2021-10-12       Impact factor: 2.316

3.  Selection and Validation of Reference Genes for RT-qPCR Normalization in Bradysia odoriphaga (Diptera: Sciaridae) Under Insecticides Stress.

Authors:  Haiyan Fu; Tubiao Huang; Cheng Yin; Zhenhua Xu; Chao Li; Chunguang Liu; Tong Wu; Fuqiang Song; Fujuan Feng; Fengshan Yang
Journal:  Front Physiol       Date:  2022-01-11       Impact factor: 4.566

4.  Selection and Validation of Reference Genes For qRT-PCR Analysis of Rhopalosiphum padi (Hemiptera: Aphididae).

Authors:  Mengyi Li; Xinan Li; Chao Wang; Qiuchi Li; Saige Zhu; Yunhui Zhang; Xiangrui Li; Fengshan Yang; Xun Zhu
Journal:  Front Physiol       Date:  2021-04-14       Impact factor: 4.566

5.  Identification and Evaluation of Suitable Reference Genes for RT-qPCR Analysis in Hippodamia variegata (Coleoptera: Coccinellidae) Under Different Biotic and Abiotic Conditions.

Authors:  Jiaoxin Xie; Tinghui Liu; Adel Khashaveh; Chaoqun Yi; Xiaoxu Liu; Yongjun Zhang
Journal:  Front Physiol       Date:  2021-05-17       Impact factor: 4.566

6.  Evaluation of Reference Genes in Glenea cantor (Fabricius) by Using qRT-PCR.

Authors:  Ran-Ran Su; Zhong-Yan Huang; Chao-Wei Qin; Xia-Lin Zheng; Wen Lu; Xiao-Yun Wang
Journal:  Genes (Basel)       Date:  2021-12-14       Impact factor: 4.096

7.  Selection and Validation of Reference Genes for Quantitative Real-Time PCR Normalization in Athetis dissimilis (Lepidoptera: Noctuidae) Under Different Conditions.

Authors:  Jinrong Tang; Gemei Liang; Shaoqi Dong; Shuang Shan; Man Zhao; Xianru Guo
Journal:  Front Physiol       Date:  2022-02-22       Impact factor: 4.566

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.