Literature DB >> 32357773

Probabilistic performance estimators for computational chemistry methods: Systematic improvement probability and ranking probability matrix. I. Theory.

Pascal Pernot1, Andreas Savin2.   

Abstract

The comparison of benchmark error sets is an essential tool for the evaluation of theories in computational chemistry. The standard ranking of methods by their mean unsigned error is unsatisfactory for several reasons linked to the non-normality of the error distributions and the presence of underlying trends. Complementary statistics have recently been proposed to palliate such deficiencies, such as quantiles of the absolute error distribution or the mean prediction uncertainty. We introduce here a new score, the systematic improvement probability, based on the direct system-wise comparison of absolute errors. Independent of the chosen scoring rule, the uncertainty of the statistics due to the incompleteness of the benchmark datasets is also generally overlooked. However, this uncertainty is essential to appreciate the robustness of rankings. In the present article, we develop two indicators based on robust statistics to address this problem: Pinv, the inversion probability between two values of a statistic, and Pr, the ranking probability matrix. We demonstrate also the essential contribution of the correlations between error sets in these scores comparisons.

Year:  2020        PMID: 32357773     DOI: 10.1063/5.0006202

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Uncertainty quantification in classical molecular dynamics.

Authors:  Shunzhou Wan; Robert C Sinclair; Peter V Coveney
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2021-03-29       Impact factor: 4.226

2.  A Generalized Regression Neural Network Model for Predicting the Curing Characteristics of Carbon Black-Filled Rubber Blends.

Authors:  Ivan Kopal; Ivan Labaj; Juliána Vršková; Marta Harničárová; Jan Valíček; Darina Ondrušová; Jan Krmela; Zuzana Palková
Journal:  Polymers (Basel)       Date:  2022-02-09       Impact factor: 4.329

  2 in total

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