Literature DB >> 32356655

Discovery and Characterization of a Class IV Lanthipeptide with a Nonoverlapping Ring Pattern.

Hengqian Ren1, Chengyou Shi1, Ian R Bothwell2, Wilfred A van der Donk2,3,4, Huimin Zhao1,2,5,6,4.   

Abstract

Lanthipeptides constitute a major family of ribosomally synthesized and post-translationally modified peptides (RiPPs). They are classified into four subfamilies, based on the characteristics of their lanthipeptide synthetases. While over a hundred lanthipeptides have been discovered to date, very few of them are class IV lanthipeptides and the latter are all structurally similar. Here, we identified an uncharacterized group of class IV lanthipeptides using bioinformatics analysis. One representative pathway from Streptomyces sp. NRRL S-1022 was expressed in Escherichia coli, which generated a lanthipeptide with two nonoverlapping rings that have not been reported for known class IV lanthipeptides. Further investigation into the biosynthetic mechanism revealed that multiple modification pathways are in operation in which dehydration and cyclization occur in parallel. While peptidases for maturation of class IV lanthipeptides have been elusive, two aminopeptidases encoded in the genome of Streptomyces sp. NRRL S-1022 were shown to process the modified peptide by the dual endopeptidase/aminopeptidase activity. This work opens doors to discover more class IV lanthipeptides with interesting structural features and biological activities.

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Year:  2020        PMID: 32356655      PMCID: PMC7814421          DOI: 10.1021/acschembio.0c00267

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  20 in total

1.  THE INHIBITING EFFECT OF STREPTOCOCCUS LACTIS ON LACTOBACILLUS BULGARICUS.

Authors:  L A Rogers
Journal:  J Bacteriol       Date:  1928-11       Impact factor: 3.490

2.  A plug-and-play pathway refactoring workflow for natural product research in Escherichia coli and Saccharomyces cerevisiae.

Authors:  Hengqian Ren; Pingfan Hu; Huimin Zhao
Journal:  Biotechnol Bioeng       Date:  2017-06-05       Impact factor: 4.530

Review 3.  Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes.

Authors:  Lindsay M Repka; Jonathan R Chekan; Satish K Nair; Wilfred A van der Donk
Journal:  Chem Rev       Date:  2017-01-30       Impact factor: 60.622

4.  Zn-dependent bifunctional proteases are responsible for leader peptide processing of class III lanthipeptides.

Authors:  Shaoming Chen; Bing Xu; Erquan Chen; Jiaqi Wang; Jingxia Lu; Stefano Donadio; Huiming Ge; Huan Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-24       Impact factor: 11.205

5.  Leader Peptide Establishes Dehydration Order, Promotes Efficiency, and Ensures Fidelity During Lacticin 481 Biosynthesis.

Authors:  Christopher J Thibodeaux; Joshua Wagoner; Yi Yu; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2016-05-10       Impact factor: 15.419

6.  Investigation of Substrate Recognition and Biosynthesis in Class IV Lanthipeptide Systems.

Authors:  Julian D Hegemann; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2018-04-19       Impact factor: 15.419

7.  Biosynthesis of the class III lantipeptide catenulipeptin.

Authors:  Huan Wang; Wilfred A van der Donk
Journal:  ACS Chem Biol       Date:  2012-07-02       Impact factor: 4.634

8.  Mechanistic studies of Ser/Thr dehydration catalyzed by a member of the LanL lanthionine synthetase family.

Authors:  Yuki Goto; Ayşe Okesli; Wilfred A van der Donk
Journal:  Biochemistry       Date:  2011-01-13       Impact factor: 3.162

9.  Distributive and directional behavior of lantibiotic synthetases revealed by high-resolution tandem mass spectrometry.

Authors:  M Violet Lee; Leigh Anne Furgerson Ihnken; Young Ok You; Amanda L McClerren; Wilfred A van der Donk; Neil L Kelleher
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

10.  Mechanistic studies on the substrate-tolerant lanthipeptide synthetase ProcM.

Authors:  Subha Mukherjee; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2014-07-08       Impact factor: 15.419

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  8 in total

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2.  A ribosomally synthesised and post-translationally modified peptide containing a β-enamino acid and a macrocyclic motif.

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3.  Identification of the Catalytic Residues in the Cyclase Domain of the Class IV Lanthipeptide Synthetase SgbL.

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4.  Conformational remodeling enhances activity of lanthipeptide zinc-metallopeptidases.

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Review 5.  Therapeutic Application of Lantibiotics and Other Lanthipeptides: Old and New Findings.

Authors:  Anton Du Preez van Staden; Winschau F van Zyl; Marla Trindade; Leon M T Dicks; Carine Smith
Journal:  Appl Environ Microbiol       Date:  2021-06-25       Impact factor: 4.792

Review 6.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

7.  Correlational networking guides the discovery of unclustered lanthipeptide protease-encoding genes.

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8.  A scalable platform to discover antimicrobials of ribosomal origin.

Authors:  Richard S Ayikpoe; Chengyou Shi; Alexander J Battiste; Sara M Eslami; Sangeetha Ramesh; Max A Simon; Ian R Bothwell; Hyunji Lee; Andrew J Rice; Hengqian Ren; Qiqi Tian; Lonnie A Harris; Raymond Sarksian; Lingyang Zhu; Autumn M Frerk; Timothy W Precord; Wilfred A van der Donk; Douglas A Mitchell; Huimin Zhao
Journal:  Nat Commun       Date:  2022-10-17       Impact factor: 17.694

  8 in total

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