| Literature DB >> 32354194 |
Fangyu Du1, Qifan Zhou1, Wenjiao Sun1, Cheng Yang2, Chunfu Wu2, Lihui Wang2, Guoliang Chen1.
Abstract
5-Hydroxyindole derivatives have various demonstrated biological activities. Herein, we usedEntities:
Keywords: 5-hydroxyindole; EZH2 inhibitors; anti-tumor; trichloroisocyanuric acid
Mesh:
Substances:
Year: 2020 PMID: 32354194 PMCID: PMC7248849 DOI: 10.3390/molecules25092059
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Selected natural products and pharmaceuticals containing 5-hydroxyindole scaffold.
Representative EZH2Is in clinical trials.
| Compound | Structure | Highest Phase | Tumor Type | Organization |
|---|---|---|---|---|
| GSK–126 [ |
| Discontinued | Solid tumors, relapsed and refractory diffuse large B-cell lymphoma (DLBCL) | GlaxoSmithKline |
| Tazemetostat |
| Launched | Metastatic / local advanced epithelioid sarcoma | Epizyme |
| CPI–1205 [ |
| Phase I/II | Metastatic castration-resistant prostate cancer (mCRPC) | Constellation Pharmaceuticals |
| Valemetostat |
| Phase I | Acute myeloid and lymphocytic leukemia | Daiichi Sankyo |
| PF–06821497 [ |
| Phase I | Elapsed or refractory small cell lung cancer (SCLC), CRPC, DLBCL and FL | Pfizer |
| SHR–2554 [ | undisclosed | Phase I | Relapsed or refractory mature lymphoid neoplasms | Jiangsu Hengrui |
Scheme 1Synthetic route to target compounds via the key TCCA-catalyzed condensation and Nenitzescu synthesis.
Figure 22D trends of the React IR experiment. (A) Ethyl acetoacetate (1.0 g, 7.68 mmol), benzylamine (0.82 g, 7.68 mmol) and MeCN (5 mL) were used; (B) Ethyl acetoacetate (1.0 g, 7.68 mmol), benzylamine (0.82 g, 7.68 mmol), TCCA (34.8 mg, 0.15 mmol) and MeCN (5 mL) were used. The reaction was conducted under ice bath conditions and allowed to naturally reach room temperature.
Scope with respect to substrates using TCCA as a catalyst a.
| Entry | R1 | R2 | R3 | Product | Time (min) | Yield (%) b |
|---|---|---|---|---|---|---|
| 1 | Me | OEt |
|
| 10 | 95 |
| 2 | Me | OEt |
|
| 10 | 98 |
| 3 | Me | OEt |
|
| 20 | 92 |
| 4 | Me | OEt |
|
| 10 | 94 |
| 5 | Me | OEt |
|
| 10 | 95 |
| 6 | Me | OEt |
|
| 15 | 96 |
| 7 | Me | OEt |
|
| 40 | 95 |
| 8 | Me | OEt |
|
| 60 | 90 |
| 9 | Me | OEt |
|
| 15 | 94 |
| 10 | Me | OtBu |
|
| 10 | 99 |
| 11 | Me | OtBu |
|
| 10 | 94 |
| 12 | Me | OtBu |
|
| 40 | 93 |
| 13 | Me | OtBu |
|
| 40 | 92 |
| 14 | Me | Me |
|
| 40 | 90 |
| 15 | Me | Me |
|
| 60 | 86 |
| 16 | Ph | OEt |
|
| 50 | 92 |
a Unless otherwise noted, β-diketones or β-ketoesters (7.68 mmol), amine (7.68 mmol), TCCA (0.15 mmol) and CH3CN (5 mL) were used; the reactions were conducted under ice bath and naturally elevated to room temperature. b Crude yield.
Scheme 2Synthetic route to 5-hydroxyindole-based EZH2Is.
Antiproliferative effects of 5-hydroxyindole-based inhibitors against K562 cells.
| Compd. | IC50 (μM) ± SEM a | cLogP b | Compd. | IC50 (μM) ± SEM a | cLogP b |
|---|---|---|---|---|---|
|
| 83.8 ± 1.8 | 3.94 |
| >100 | 3.53 |
|
| 72.6 ± 1.6 | 5.10 |
| 63.9 ± 3.2 | 4.40 |
|
| 86.1 ± 2.7 | 4.33 |
| 56.3 ± 1.7 | 3.47 |
|
| 52.6 ± 0.4 | 5.10 |
| >100 | 5.02 |
|
| 71.1 ± 3.2 | 5.49 |
| >100 | 4.72 |
|
| >100 | 4.80 |
| >100 | 4.89 |
|
| >100 | 5.02 |
| 68.1 ± 1.2 | 5.27 |
|
| >100 | 4.63 |
| >100 | 5.28 |
|
| >100 | 3.94 |
| 51.8 ± 1.6 | 5.60 |
|
| 58.7 ± 3.8 | 4.13 |
| >100 | 5.59 |
|
| 55.2 ± 1.8 | 5.29 |
| 59.2 ± 0.6 | 4.73 |
|
| 85.5 ± 1.0 | 3.88 |
a IC50: 50% inhibitory concentration (determined by standard CCK-8 assay) after treatment of 48 h. Each experiment was carried out in triplicate. b Predicted by pkCSM [39].
Figure 3Effect of L–01~L–04 on cellular H3K27Me3 levels as determined by western blot analysis. Western blot analysis of H3K27Me3 and Histone3 from whole cell extracts on K562 cells after treatment of 72 h. The letter T is abbreviation of tazemetostat.
Figure 4Molecular modeling of 5-hydroxyindole-based inhibitors bound to EZH2 (Note: PDB ID 4W2R). (A) Binding pocket surface of L–04 (light blue) and tazemetostat (yellow); (B) Binding pose of L–04. Hydrogen bond contacts are shown with dashed lines and small molecules are shown as sticks; (C) Binding interaction of L–04; (D) Overlay of L–04 (light blue), L–19 (pink) and L–22 (light yellow) docking poses.