Literature DB >> 32342312

Genome Editing As an Approach to the Study of in Vivo Transcription Reprogramming.

Y Y Silaeva1, V A Kalmykov2, E A Varlamova2,3, E N Korshunov2, D S Korshunova2, M V Kubekina2, A A Shtil2,3, I B Roninson2,4, A V Deykin5,6.   

Abstract

CDK8-mediated transcriptional reprogramming is essential for an extensive gene expression. Constitutive knockouts of the cdk8 gene are lethal at the morula stage. For modeling transcriptional reprogramming in an adult organism, we investigated the possibility to attenuate the CDK8 kinase activity with a F97G mutation in exon 3 of the cdk8 gene. According to preliminary experimental data, this mutation should lead to a decrease in CDK8 kinase activity. To edit the genome of laboratory mice, the CRISPR/Cas9 technology was used, in which the introduction of a double-stranded gap occurred at a distance of 128 nucleotide pairs from the planned site of the introduced mutation. To introduce the mutation, a matrix for homologous repair was used as part of plasmid DNA, with homologous arms 903 and 484 bp in the 5'-3' region from the point of double-stranded rupture, respectively. As a result, mice with site-specific target mutations in exon 3 of the cdk8 gene were obtained. We for the first time demonstrated a high efficacy of the mutation 128 bp apart from the site of double-strand break. Viable animals with the F97G mutation in the catalytic domain of CDK8 kinase were obtained for the first time. The resulting cdk8 mutant mice will be used in subsequent studies to simulate the processes involving transcription reprogramming.

Entities:  

Keywords:  CDK8 protein kinase; CRISPR/Cas9; genetically modified animals; mammalian genome editing

Year:  2020        PMID: 32342312     DOI: 10.1134/S1607672920010147

Source DB:  PubMed          Journal:  Dokl Biochem Biophys        ISSN: 1607-6729            Impact factor:   0.788


  13 in total

1.  E-CRISP: fast CRISPR target site identification.

Authors:  Florian Heigwer; Grainne Kerr; Michael Boutros
Journal:  Nat Methods       Date:  2014-02       Impact factor: 28.547

2.  CDK8/19 Mediator kinases potentiate induction of transcription by NFκB.

Authors:  Mengqian Chen; Jiaxin Liang; Hao Ji; Zhengguan Yang; Serena Altilia; Bing Hu; Adam Schronce; Martina S J McDermott; Gary P Schools; Chang-Uk Lim; David Oliver; Michael S Shtutman; Tao Lu; George R Stark; Donald C Porter; Eugenia V Broude; Igor B Roninson
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-30       Impact factor: 11.205

3.  Cdk8 is essential for preimplantation mouse development.

Authors:  Thomas Westerling; Emilia Kuuluvainen; Tomi P Mäkelä
Journal:  Mol Cell Biol       Date:  2007-07-09       Impact factor: 4.272

4.  Decrease in pool of T lymphocytes with surface phenotypes of effector and central memory cells under influence of TCR transgenic β-chain expression.

Authors:  Yu Yu Silaeva; A A Kalinina; M S Vagida; L M Khromykh; A V Deikin; T G Ermolkevich; E R Sadchikova; I L Goldman; D B Kazansky
Journal:  Biochemistry (Mosc)       Date:  2013-05       Impact factor: 2.487

5.  CDK8 Selectively Promotes the Growth of Colon Cancer Metastases in the Liver by Regulating Gene Expression of TIMP3 and Matrix Metalloproteinases.

Authors:  Jiaxin Liang; Mengqian Chen; Daniel Hughes; Alexander A Chumanevich; Serena Altilia; Vimala Kaza; Chang-Uk Lim; Hippokratis Kiaris; Karthikeyan Mythreye; Maria Marjorette Pena; Eugenia V Broude; Igor B Roninson
Journal:  Cancer Res       Date:  2018-09-05       Impact factor: 12.701

6.  Inhibition of CDK8 mediator kinase suppresses estrogen dependent transcription and the growth of estrogen receptor positive breast cancer.

Authors:  Martina S J McDermott; Alexander A Chumanevich; Chang-Uk Lim; Jiaxin Liang; Mengqian Chen; Serena Altilia; David Oliver; James M Rae; Michael Shtutman; Hippokratis Kiaris; Balázs Győrffy; Igor B Roninson; Eugenia V Broude
Journal:  Oncotarget       Date:  2017-02-21

7.  Inhibition of Cdk8/Cdk19 Activity Promotes Treg Cell Differentiation and Suppresses Autoimmune Diseases.

Authors:  Zengli Guo; Gang Wang; Yanfang Lv; Yisong Y Wan; Junnian Zheng
Journal:  Front Immunol       Date:  2019-08-20       Impact factor: 7.561

Review 8.  Regulatory functions of the Mediator kinases CDK8 and CDK19.

Authors:  Charli B Fant; Dylan J Taatjes
Journal:  Transcription       Date:  2018-12-26

9.  CHOPCHOP v3: expanding the CRISPR web toolbox beyond genome editing.

Authors:  Kornel Labun; Tessa G Montague; Maximilian Krause; Yamila N Torres Cleuren; Håkon Tjeldnes; Eivind Valen
Journal:  Nucleic Acids Res       Date:  2019-07-02       Impact factor: 16.971

10.  Identification of transcription factors and single nucleotide polymorphisms of Lrh1 and its homologous genes in Lrh1-knockout pancreas of mice.

Authors:  Maochun Tang; Li Cheng; Rongrong Jia; Lei Qiu; Hua Liu; Shu Zhou; Xiuying Ma; Guoyong Hu; Xingpeng Wang; Yan Zhao
Journal:  BMC Med Genet       Date:  2014-04-15       Impact factor: 2.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.