Literature DB >> 32338742

Encoding multiple digital DNA signals in a single analog channel.

Yan Helen Yan1,2, David Yu Zhang1,2, Lucia R Wu2.   

Abstract

For many analytic and biomedical applications, the presence of an analyte above or below a critical concentration is more informative for decision making than the actual concentration value. Straightforward analog-to-digital signal conversion does not take full advantage of the precision and dynamic range of modern sensors. Here, we present and experimentally demonstrate an analog-to-multiple-digital signal conversion, reporting digital signals that indicate whether the concentrations of specific DNA sequences exceed respective threshold values. These threshold values can be individually programmed for each target sequence. Experimentally, we showed representation of four DNA targets' information in a single fluorescence channel.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Year:  2020        PMID: 32338742      PMCID: PMC7293012          DOI: 10.1093/nar/gkaa303

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  30 in total

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3.  Enzyme-free nucleic acid logic circuits.

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5.  Scaling up digital circuit computation with DNA strand displacement cascades.

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Review 7.  Electrochemical Methods for the Analysis of Clinically Relevant Biomolecules.

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8.  Optimizing the specificity of nucleic acid hybridization.

Authors:  David Yu Zhang; Sherry Xi Chen; Peng Yin
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9.  Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.

Authors:  Daniel Aird; Michael G Ross; Wei-Sheng Chen; Maxwell Danielsson; Timothy Fennell; Carsten Russ; David B Jaffe; Chad Nusbaum; Andreas Gnirke
Journal:  Genome Biol       Date:  2011-02-21       Impact factor: 13.583

10.  Continuously tunable nucleic acid hybridization probes.

Authors:  Lucia R Wu; Juexiao Sherry Wang; John Z Fang; Emily R Evans; Alessandro Pinto; Irena Pekker; Richard Boykin; Celine Ngouenet; Philippa J Webster; Joseph Beechem; David Yu Zhang
Journal:  Nat Methods       Date:  2015-10-19       Impact factor: 28.547

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