Literature DB >> 32335911

Next-generation sequencing approaches and challenges in the diagnosis of developmental anomalies and intellectual disability.

Ange-Line Bruel1,2,3, Antonio Vitobello1,2, Frédéric Tran Mau-Them1,2, Sophie Nambot1,4, Arthur Sorlin1,2,4,5, Anne-Sophie Denommé-Pichon1,2,4, Julian Delanne1,4, Sébastien Moutton1,4, Patrick Callier1,2, Yannis Duffourd1,2, Christophe Philippe1,2, Laurence Faivre1,4, Christel Thauvin-Robinet1,2,3,4.   

Abstract

Recent advances in next-generation sequencing (NGS) technologies have revolutionized the field of human genetics. Alongside a broad panel of bioinformatics tools and databases, NGS technologies have unprecedentedly improved the molecular diagnosis rate and the identification of new genes associated with rare disorders. However, about 50% of patients remain without a final diagnosis. Here, we highlight the utility of NGS applications in developmental anomalies and intellectual disability, illustrating their main advantages and pitfalls. Through specific examples, we suggest novel strategies and tools for identifying the molecular bases in the remaining patients, and we outline future challenges.
© 2020 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  NGS; OMICS; data-sharing; intellectual disability

Year:  2020        PMID: 32335911     DOI: 10.1111/cge.13764

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  6 in total

1.  Germline variants in tumor suppressor FBXW7 lead to impaired ubiquitination and a neurodevelopmental syndrome.

Authors:  Sarah E M Stephenson; Gregory Costain; Laura E R Blok; Michael A Silk; Thanh Binh Nguyen; Xiaomin Dong; Dana E Alhuzaimi; James J Dowling; Susan Walker; Kimberly Amburgey; Robin Z Hayeems; Lance H Rodan; Marc A Schwartz; Jonathan Picker; Sally A Lynch; Aditi Gupta; Kristen J Rasmussen; Lisa A Schimmenti; Eric W Klee; Zhiyv Niu; Katherine E Agre; Ilana Chilton; Wendy K Chung; Anya Revah-Politi; P Y Billie Au; Christopher Griffith; Melissa Racobaldo; Annick Raas-Rothschild; Bruria Ben Zeev; Ortal Barel; Sebastien Moutton; Fanny Morice-Picard; Virginie Carmignac; Jenny Cornaton; Nathalie Marle; Orrin Devinsky; Chandler Stimach; Stephanie Burns Wechsler; Bryan E Hainline; Katie Sapp; Marjolaine Willems; Ange-Line Bruel; Kerith-Rae Dias; Carey-Anne Evans; Tony Roscioli; Rani Sachdev; Suzanna E L Temple; Ying Zhu; Joshua J Baker; Ingrid E Scheffer; Fiona J Gardiner; Amy L Schneider; Alison M Muir; Heather C Mefford; Amy Crunk; Elizabeth M Heise; Francisca Millan; Kristin G Monaghan; Richard Person; Lindsay Rhodes; Sarah Richards; Ingrid M Wentzensen; Benjamin Cogné; Bertrand Isidor; Mathilde Nizon; Marie Vincent; Thomas Besnard; Amelie Piton; Carlo Marcelis; Kohji Kato; Norihisa Koyama; Tomoo Ogi; Elaine Suk-Ying Goh; Christopher Richmond; David J Amor; Jessica O Boyce; Angela T Morgan; Michael S Hildebrand; Antony Kaspi; Melanie Bahlo; Rún Friðriksdóttir; Hildigunnur Katrínardóttir; Patrick Sulem; Kári Stefánsson; Hans Tómas Björnsson; Simone Mandelstam; Manuela Morleo; Milena Mariani; Marcello Scala; Andrea Accogli; Annalaura Torella; Valeria Capra; Mathew Wallis; Sandra Jansen; Quinten Weisfisz; Hugoline de Haan; Simon Sadedin; Sze Chern Lim; Susan M White; David B Ascher; Annette Schenck; Paul J Lockhart; John Christodoulou; Tiong Yang Tan
Journal:  Am J Hum Genet       Date:  2022-04-07       Impact factor: 11.043

Review 2.  Intellectual disability genomics: current state, pitfalls and future challenges.

Authors:  Nuno Maia; Maria João Nabais Sá; Manuel Melo-Pires; Arjan P M de Brouwer; Paula Jorge
Journal:  BMC Genomics       Date:  2021-12-20       Impact factor: 3.969

3.  Biallelic truncation variants in ATP9A are associated with a novel autosomal recessive neurodevelopmental disorder.

Authors:  Francesca Mattioli; Hossein Darvish; Sohail Aziz Paracha; Abbas Tafakhori; Saghar Ghasemi Firouzabadi; Marjan Chapi; Hafiz Muhammad Azhar Baig; Alexandre Reymond; Stylianos E Antonarakis; Muhammad Ansar
Journal:  NPJ Genom Med       Date:  2021-11-11       Impact factor: 8.617

4.  Whole-exome sequencing in patients with maturation arrest: a potential additional diagnostic tool for prevention of recurrent negative testicular sperm extraction outcomes.

Authors:  F Ghieh; A L Barbotin; N Swierkowski-Blanchard; C Leroy; J Fortemps; C Gerault; C Hue; H Mambu Mambueni; S Jaillard; M Albert; M Bailly; V Izard; D Molina-Gomes; F Marcelli; J Prasivoravong; V Serazin; M N Dieudonne; M Delcroix; H J Garchon; A Louboutin; B Mandon-Pepin; S Ferlicot; F Vialard
Journal:  Hum Reprod       Date:  2022-05-30       Impact factor: 6.353

5.  Genetic analysis of intellectual disability and autism.

Authors:  Pietro Chiurazzi; Aysha Karim Kiani; Jan Miertus; Stefano Paolacci; Shila Barati; Elena Manara; Liborio Stuppia; Fiorella Gurrieri; Matteo Bertelli
Journal:  Acta Biomed       Date:  2020-11-09

6.  New Candidates for Autism/Intellectual Disability Identified by Whole-Exome Sequencing.

Authors:  Lucia Pia Bruno; Gabriella Doddato; Floriana Valentino; Margherita Baldassarri; Rossella Tita; Chiara Fallerini; Mirella Bruttini; Caterina Lo Rizzo; Maria Antonietta Mencarelli; Francesca Mari; Anna Maria Pinto; Francesca Fava; Alessandra Fabbiani; Vittoria Lamacchia; Anna Carrer; Valentina Caputo; Stefania Granata; Elisa Benetti; Kristina Zguro; Simone Furini; Alessandra Renieri; Francesca Ariani
Journal:  Int J Mol Sci       Date:  2021-12-14       Impact factor: 5.923

  6 in total

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