Literature DB >> 32322099

Multilevel omics for the discovery of biomarkers and therapeutic targets for stroke.

Joan Montaner1,2,3, Laura Ramiro4, Alba Simats4, Steffen Tiedt5, Konstantinos Makris6, Glen C Jickling7, Stephanie Debette8,9, Jean-Charles Sanchez10, Alejandro Bustamante4.   

Abstract

Despite many years of research, no biomarkers for stroke are available to use in clinical practice. Progress in high-throughput technologies has provided new opportunities to understand the pathophysiology of this complex disease, and these studies have generated large amounts of data and information at different molecular levels. The integration of these multi-omics data means that thousands of proteins (proteomics), genes (genomics), RNAs (transcriptomics) and metabolites (metabolomics) can be studied simultaneously, revealing interaction networks between the molecular levels. Integrated analysis of multi-omics data will provide useful insight into stroke pathogenesis, identification of therapeutic targets and biomarker discovery. In this Review, we detail current knowledge on the pathology of stroke and the current status of biomarker research in stroke. We summarize how proteomics, metabolomics, transcriptomics and genomics are all contributing to the identification of new candidate biomarkers that could be developed and used in clinical stroke management.

Entities:  

Year:  2020        PMID: 32322099     DOI: 10.1038/s41582-020-0350-6

Source DB:  PubMed          Journal:  Nat Rev Neurol        ISSN: 1759-4758            Impact factor:   42.937


  47 in total

Review 1.  In Vitro Oxygen Glucose Deprivation Model of Ischemic Stroke: A Proteomics-Driven Systems Biological Perspective.

Authors:  Manju Babu; Nikhil Singh; Arnab Datta
Journal:  Mol Neurobiol       Date:  2022-01-26       Impact factor: 5.590

2.  Plasma lipidomics analysis reveals altered lipids signature in patients with osteonecrosis of the femoral head.

Authors:  Yuzhu Yan; Jihan Wang; Dageng Huang; Jing Lv; Hui Li; Jing An; Xiaojian Cui; Heping Zhao
Journal:  Metabolomics       Date:  2022-02-11       Impact factor: 4.290

Review 3.  Genetics of common cerebral small vessel disease.

Authors:  Constance Bordes; Muralidharan Sargurupremraj; Aniket Mishra; Stéphanie Debette
Journal:  Nat Rev Neurol       Date:  2022-01-05       Impact factor: 42.937

Review 4.  Application of omics in hypertension and resistant hypertension.

Authors:  Jiuqi Guo; Xiaofan Guo; Yingxian Sun; Zhao Li; Pengyu Jia
Journal:  Hypertens Res       Date:  2022-03-09       Impact factor: 3.872

5.  Mitochondrial DNA Copy Number as a Marker and Mediator of Stroke Prognosis: Observational and Mendelian Randomization Analyses.

Authors:  Michael Robert Chong; Sukrit Narula; Robert Morton; Conor Judge; Loubna Akhabir; Nathan Cawte; Nazia Pathan; Ricky Lali; Pedrum Mohammadi-Shemirani; Ashkan Shoamanesh; Martin O'Donnell; Salim Yusuf; Peter Langhorne; Guillaume Paré
Journal:  Neurology       Date:  2021-12-08       Impact factor: 9.910

6.  DNA Hypomethylation of the MPO Gene in Peripheral Blood Leukocytes Is Associated with Cerebral Stroke in the Acute Phase.

Authors:  Olga Bushueva; Ekaterina Barysheva; Anton Markov; Andrey Belykh; Iuliia Koroleva; Egor Churkin; Alexey Polonikov; Vladimir Ivanov; Maria Nazarenko
Journal:  J Mol Neurosci       Date:  2021-04-17       Impact factor: 3.444

Review 7.  Review of multi-omics data resources and integrative analysis for human brain disorders.

Authors:  Xianjun Dong; Chunyu Liu; Mikhail Dozmorov
Journal:  Brief Funct Genomics       Date:  2021-07-17       Impact factor: 4.241

Review 8.  Promising Biomarker Candidates for Cardioembolic Stroke Etiology. A Brief Narrative Review and Current Opinion.

Authors:  Arnold Markus; Schütz Valerie; Katan Mira
Journal:  Front Neurol       Date:  2021-02-25       Impact factor: 4.003

9.  Immune-inflammatory, coagulation, adhesion, and imaging biomarkers combined in machine learning models improve the prediction of death 1 year after ischemic stroke.

Authors:  Ana Lucia Cruz Fürstenberger Lehmann; Daniela Frizon Alfieri; Maria Caroline Martins de Araújo; Emanuelle Roberto Trevisani; Maisa Rocha Nagao; Francisco Spessatto Pesente; Jair Roberto Gelinski; Leonardo Bodner de Freitas; Tamires Flauzino; Márcio Francisco Lehmann; Marcell Alysson Batisti Lozovoy; José Wander Breganó; Andréa Name Colado Simão; Michael Maes; Edna Maria Vissoci Reiche
Journal:  Clin Exp Med       Date:  2021-06-12       Impact factor: 3.984

Review 10.  The Combination of Tradition and Future: Data-Driven Natural-Product-Based Treatments for Parkinson's Disease.

Authors:  Zhijun Miao; Jinwei Bai; Li Shen; Rajeev K Singla
Journal:  Evid Based Complement Alternat Med       Date:  2021-07-14       Impact factor: 2.629

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