Literature DB >> 32320730

Applications of personalised signalling network models in precision oncology.

Jordan F Hastings1, Yolande E I O'Donnell1, Dirk Fey2, David R Croucher3.   

Abstract

As our ability to provide in-depth, patient-specific characterisation of the molecular alterations within tumours rapidly improves, it is becoming apparent that new approaches will be required to leverage the power of this data and derive the full benefit for each individual patient. Systems biology approaches are beginning to emerge within this field as a potential method of incorporating large volumes of network level data and distilling a coherent, clinically-relevant prediction of drug response. However, the initial promise of this developing field is yet to be realised. Here we argue that in order to develop these precise models of individual drug response and tailor treatment accordingly, we will need to develop mathematical models capable of capturing both the dynamic nature of drug-response signalling networks and key patient-specific information such as mutation status or expression profiles. We also review the modelling approaches commonly utilised within this field, and outline recent examples of their use in furthering the application of systems biology for a precision medicine approach to cancer treatment.
Copyright © 2020 Elsevier Inc. All rights reserved.

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Mesh:

Year:  2020        PMID: 32320730     DOI: 10.1016/j.pharmthera.2020.107555

Source DB:  PubMed          Journal:  Pharmacol Ther        ISSN: 0163-7258            Impact factor:   12.310


  7 in total

Review 1.  Innovations in Genomics and Big Data Analytics for Personalized Medicine and Health Care: A Review.

Authors:  Mubashir Hassan; Faryal Mehwish Awan; Anam Naz; Enrique J deAndrés-Galiana; Oscar Alvarez; Ana Cernea; Lucas Fernández-Brillet; Juan Luis Fernández-Martínez; Andrzej Kloczkowski
Journal:  Int J Mol Sci       Date:  2022-04-22       Impact factor: 6.208

2.  Translocating proteins compartment-specifically alter the fate of epithelial-mesenchymal transition in a compartmentalized Boolean network model.

Authors:  Péter Mendik; Márk Kerestély; Sebestyén Kamp; Dávid Deritei; Nina Kunšič; Zsolt Vassy; Péter Csermely; Daniel V Veres
Journal:  NPJ Syst Biol Appl       Date:  2022-06-09

3.  Mechanistic modeling of the SARS-CoV-2 disease map.

Authors:  Kinza Rian; Marina Esteban-Medina; Marta R Hidalgo; Cankut Çubuk; Matias M Falco; Carlos Loucera; Devrim Gunyel; Marek Ostaszewski; María Peña-Chilet; Joaquín Dopazo
Journal:  BioData Min       Date:  2021-01-21       Impact factor: 2.522

4.  COVID-19 engages clinical markers for the management of cancer and cancer-relevant regulators of cell proliferation, death, migration, and immune response.

Authors:  Serhiy Souchelnytskyi; Andriy Nera; Nazariy Souchelnytskyi
Journal:  Sci Rep       Date:  2021-03-04       Impact factor: 4.379

Review 5.  Computational Models for Clinical Applications in Personalized Medicine-Guidelines and Recommendations for Data Integration and Model Validation.

Authors:  Catherine Bjerre Collin; Tom Gebhardt; Martin Golebiewski; Tugce Karaderi; Maximilian Hillemanns; Faiz Muhammad Khan; Ali Salehzadeh-Yazdi; Marc Kirschner; Sylvia Krobitsch; Lars Kuepfer
Journal:  J Pers Med       Date:  2022-01-26

Review 6.  Personalized Medicine for Neuroblastoma: Moving from Static Genotypes to Dynamic Simulations of Drug Response.

Authors:  Jeremy Z R Han; Jordan F Hastings; Monica Phimmachanh; Dirk Fey; Walter Kolch; David R Croucher
Journal:  J Pers Med       Date:  2021-05-11

Review 7.  Can Systems Biology Advance Clinical Precision Oncology?

Authors:  Andrea Rocca; Boris N Kholodenko
Journal:  Cancers (Basel)       Date:  2021-12-16       Impact factor: 6.575

  7 in total

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