| Literature DB >> 32314790 |
Chikara Ogimi1, Yae Jean Kim2, Emily T Martin3, Hee Jae Huh4, Cheng-Hsun Chiu5, Janet A Englund1.
Abstract
Coronaviruses contribute to the burden of respiratory diseases in children, frequently manifesting in upper respiratory symptoms considered to be part of the "common cold." Recent epidemics of novel coronaviruses recognized in the 21st century have highlighted issues of zoonotic origins of transmissible respiratory viruses and potential transmission, disease, and mortality related to these viruses. In this review, we discuss what is known about the virology, epidemiology, and disease associated with pediatric infection with the common community-acquired human coronaviruses, including species 229E, OC43, NL63, and HKU1, and the coronaviruses responsible for past world-wide epidemics due to severe acute respiratory syndrome and Middle East respiratory syndrome coronavirus.Entities:
Keywords: COVID-19; MERS; SARS; coronavirus; pediatric respiratory viruses
Mesh:
Year: 2020 PMID: 32314790 PMCID: PMC7188130 DOI: 10.1093/jpids/piaa037
Source DB: PubMed Journal: J Pediatric Infect Dis Soc ISSN: 2048-7193 Impact factor: 3.164
History of Human Coronaviruses
| Coronavirus | Year(s) Identified | First Identification | Reference |
|---|---|---|---|
| Alpha coronavirus: group 1 | |||
| HCoV-229E | 1960s | Boy with cold, United Kingdom: B814 isolate; medical students with colds, Chicago, Illinois: 229E (note: B814 isolate described here not further propagated) | [ |
| HCoV- NL63 | 2004 | 7-month-old and 8-month-old infants with bronchiolitis in the Netherlands | [ |
| Beta coronavirus group 2, lineage A | |||
| HCoV-OC43 | 1967–1972 | Acute respiratory infections in adults at the National Institutes of Health | [ |
| HCoV-HKU1 | 2004 | 71-year-old man with pneumonia in Hong Kong | [ |
| Beta coronavirus group 2, lineage B | |||
| SARS-CoV | 2003–2004 | Humans with severe pneumonia in China; natural host, Chinese horseshoe bats; presumed intermediate host, palm civet | [ |
| SARS-CoV-2 | 2019–2020 | Adults with acute respiratory distress syndrome/pneumonia from Wuhan, China; potential bat origin and related to SARS-CoV | [ |
| Beta coronavirus group 2, lineage C | |||
| Middle East respiratory syndrome-CoV | 2012 | Adults with acute respiratory distress syndrome in Saudi Arabia; dromedary camel as reservoir/intermediary | [ |
Abbreviations: HCoV, human coronavirus; SARS, severe acute respiratory syndrome.
Figure 1.Examples of HCoV shedding patterns in young children attending child care centers [47, 48]. Children attending group childcare were tested prospectively for respiratory viruses at each acute respiratory illness (ARI). Swabs were collected weekly from ARI onset until symptoms were nonworsening and swabs were negative by real-time-polymerase chain reaction [47]. Human coronavirus (HCoV)–positive swabs (for all species) are represented by filled circles, and negative swabs are represented by open circles. Weeks on x-axis were calculated as weeks since symptom onset with an HCoV (+) acute respiratory illness. The lower limit of positivity was set at 1000 copies/mL for this analysis. Sequencing of HCoV isolates was not performed.
Rates of Human Coronavirus and Influenza Infection With or Without Viral Coinfection by Polymerase Chain Reaction Testing in Symptomatic Patients
| Institution | Seattle Children’s Hospital, Seattle, Washington (<18 years) | Samsung Medical Center Seoul, Korea (<18 years) |
|---|---|---|
| Test used | FilmArray (Biofire, Merieux) | LG AdvanSure RV-plus real-time polymerase chain reaction (LG Life Science) |
| Number of specimens tested | 2052 | 918 |
| HCoV detected, N (overall %) | 115 (6) | 86 (9.4) |
| HCoV+ only, N (% of all HCoV+) | 66 (57) | 50 (58) |
| HCoV coinfection: HCoV and another virus(es) detected simultaneously | 49 (43% of all HCoV-positive specimens; 2.4% overall) | 36 (42% of all HCoV-positive specimens; 3.9% overall) |
| Both HCoV+ and influenza+ | 3 (3% of all HCoV+) | 10 (12% of all HCoV+) |
| Both HCoV+ and RSV+ | 25 (22% of all HCoV+) | 8 (9% of all HCoV+) |
| Both HCoV+ and RhV/Ent+ or adenovirus+ | 15 (13% of all HCoV+) | 14 (16% of all HCoV+) |
| Influenza detected, N (overall %) | 161 (8) | 63 (7) |
| Influenza+ only, N (% of all influenza+) | 146 (91) | 46 (73) |
| Influenza coinfection: influenza and another virus(es) detected simultaneously | 15 (9% of all influenza-positive specimens; 0.7% overall) | 17 (27% of all influenza-positive specimens; 1.9% overall) |
| Both influenza+ and RSV+ | 5 (3% of all influenza+) | 1 (2% of all influenza+) |
| Both influenza+ and RhV/Ent+ | 7 (4% of all influenza+) | 5 (8% of all influenza+) |
| Both influenza+ and HCoV+ | 3 (2% of all influenza+) | 10 (16% of all influenza+) |
These data are from patients seen in hospitals (Seattle, Washington, using FilmArray, and Seoul, Korea, using LG AdvanSure RV-plus real-time polymerase chain reaction) from November 2019 through January 2020.
Abbreviations: Ent, enterovirus; HCoV, human coronavirus; RhV, rhinovirus; RSV, respiratory syncytial virus.
Figure 2.Cumulative incidence of coronavirus infection in children after allogeneic hematopoietic cell transplantation at Seattle Children’s Hospital by age (N = 404). Numbers below x-axis show the number of patients at risk by age (0–5 years vs 6–17 years). Of note, OC43 and HKU1 were detected in bronchoalveolar lavage specimens from 2 infants, respectively.