Literature DB >> 32314036

Description of Salinicola corii sp. nov., a Halotolerant Bacterium Isolated from Wetsalted Hides.

Xiaoguang Li1, Jia Chen1, Longzhan Gan1, Yongqiang Tian2, Bi Shi1.   

Abstract

A novel Gram-stain-negative, moderately halotolerant, rod-shaped bacterium, designated strain L3T, was isolated from a wetsalted hide in Chengdu, China. The organism grew optimally at 30 °C, at pH 8 and with 5-10% (w/v) NaCl. The major cellular fatty acids were C16:0, C16:1ω7c, C18:1ω7c and C19:0 cyclo ω8c; the predominant respiratory quinone was Q-9; the phospholipids consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and three unidentified phospholipids. Phylogenetic trees based on the 16S rRNA, gyrB and rpoD genes' sequences, obtained using three different algorithms, clearly revealed the isolate belonged to the genus Salinicola, and was found to be closely related to Salinicola acroporae JCM 30412T, Salinicola socius CGMCC 1.12383T and Salinicola lusitanus CR50T. The draft genome was approximately 4.5 Mb in size with 4486 predicted coding sequences, and the G+C content was 62.6 mol%. The maximum values of ANI and dDDH between strain L3T and the three above-mentioned type species were 89.2% and 63.8%, respectively. Differential phenotypic properties, together with the genome analysis, support the view that strain L3T represents a novel species, Salinicola corii sp. nov., with the type strain L3T (=CGMCC 1.17272T=KCTC 72572T).

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Year:  2020        PMID: 32314036     DOI: 10.1007/s00284-020-01989-2

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  2 in total

1.  [Salinicola socius gen. nov., sp. nov., a moderately halophilic bacterium from a naphthalene-utilizing microbial association].

Authors:  L N Anan'ina; E G Plotnikova; E Iu Gavrish; V A Demakov; L I Evtushenko
Journal:  Mikrobiologiia       Date:  2007 May-Jun

2.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

  2 in total

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