Literature DB >> 32304628

Sex-Specific Role for the Long Non-coding RNA LINC00473 in Depression.

Orna Issler1, Yentl Y van der Zee2, Aarthi Ramakrishnan1, Junshi Wang3, Chunfeng Tan4, Yong-Hwee E Loh1, Immanuel Purushothaman1, Deena M Walker1, Zachary S Lorsch1, Peter J Hamilton1, Catherine J Peña1, Erin Flaherty1, Brigham J Hartley1, Angélica Torres-Berrío1, Eric M Parise1, Hope Kronman1, Julia E Duffy1, Molly S Estill1, Erin S Calipari1, Benoit Labonté1, Rachael L Neve5, Carol A Tamminga4, Kristen J Brennand6, Yan Dong3, Li Shen1, Eric J Nestler7.   

Abstract

Depression is a common disorder that affects women at twice the rate of men. Here, we report that long non-coding RNAs (lncRNAs), a recently discovered class of regulatory transcripts, represent about one-third of the differentially expressed genes in the brains of depressed humans and display complex region- and sex-specific patterns of regulation. We identified the primate-specific, neuronal-enriched gene LINC00473 as downregulated in prefrontal cortex (PFC) of depressed females but not males. Using viral-mediated gene transfer to express LINC00473 in adult mouse PFC neurons, we mirrored the human sex-specific phenotype by inducing stress resilience solely in female mice. This sex-specific phenotype was accompanied by changes in synaptic function and gene expression selectively in female mice and, along with studies of human neuron-like cells in culture, implicates LINC00473 as a CREB effector. Together, our studies identify LINC00473 as a female-specific driver of stress resilience that is aberrant in female depression.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CREB; depression; lncRNA; sex-differences

Mesh:

Substances:

Year:  2020        PMID: 32304628      PMCID: PMC7305959          DOI: 10.1016/j.neuron.2020.03.023

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  101 in total

1.  Early life stress confers lifelong stress susceptibility in mice via ventral tegmental area OTX2.

Authors:  Catherine J Peña; Hope G Kronman; Deena M Walker; Hannah M Cates; Rosemary C Bagot; Immanuel Purushothaman; Orna Issler; Yong-Hwee Eddie Loh; Tin Leong; Drew D Kiraly; Emma Goodman; Rachael L Neve; Li Shen; Eric J Nestler
Journal:  Science       Date:  2017-06-16       Impact factor: 47.728

2.  Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.

Authors:  Moran N Cabili; Cole Trapnell; Loyal Goff; Magdalena Koziol; Barbara Tazon-Vega; Aviv Regev; John L Rinn
Journal:  Genes Dev       Date:  2011-09-02       Impact factor: 11.361

3.  Opposite Molecular Signatures of Depression in Men and Women.

Authors:  Marianne L Seney; Zhiguang Huo; Kelly Cahill; Leon French; Rachel Puralewski; Joyce Zhang; Ryan W Logan; George Tseng; David A Lewis; Etienne Sibille
Journal:  Biol Psychiatry       Date:  2018-02-19       Impact factor: 13.382

Review 4.  Integrating the roles of long and small non-coding RNA in brain function and disease.

Authors:  G Barry
Journal:  Mol Psychiatry       Date:  2014-01-28       Impact factor: 15.992

5.  Sex-specific transcriptional signatures in human depression.

Authors:  Benoit Labonté; Olivia Engmann; Immanuel Purushothaman; Caroline Menard; Junshi Wang; Chunfeng Tan; Joseph R Scarpa; Gregory Moy; Yong-Hwee E Loh; Michael Cahill; Zachary S Lorsch; Peter J Hamilton; Erin S Calipari; Georgia E Hodes; Orna Issler; Hope Kronman; Madeline Pfau; Aleksandar L J Obradovic; Yan Dong; Rachael L Neve; Scott Russo; Andrew Kazarskis; Carol Tamminga; Naguib Mechawar; Gustavo Turecki; Bin Zhang; Li Shen; Eric J Nestler
Journal:  Nat Med       Date:  2017-08-21       Impact factor: 53.440

6.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

7.  Long noncoding RNA expression in peripheral blood mononuclear cells and suicide risk in Chinese patients with major depressive disorder.

Authors:  Xuelian Cui; Wei Niu; Lingming Kong; Mingjun He; Kunhong Jiang; Shengdong Chen; Aifang Zhong; Wanshuai Li; Jim Lu; Liyi Zhang
Journal:  Brain Behav       Date:  2017-05-02       Impact factor: 2.708

8.  Comprehensive analysis of The Cancer Genome Atlas reveals a unique gene and non-coding RNA signature of fibrolamellar carcinoma.

Authors:  Timothy A Dinh; Eva C M Vitucci; Eliane Wauthier; Rondell P Graham; Wendy A Pitman; Tsunekazu Oikawa; Mengjie Chen; Grace O Silva; Kevin G Greene; Michael S Torbenson; Lola M Reid; Praveen Sethupathy
Journal:  Sci Rep       Date:  2017-03-17       Impact factor: 4.379

9.  Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression.

Authors:  Naomi R Wray; Stephan Ripke; Manuel Mattheisen; Maciej Trzaskowski; Enda M Byrne; Abdel Abdellaoui; Mark J Adams; Esben Agerbo; Tracy M Air; Till M F Andlauer; Silviu-Alin Bacanu; Marie Bækvad-Hansen; Aartjan F T Beekman; Tim B Bigdeli; Elisabeth B Binder; Douglas R H Blackwood; Julien Bryois; Henriette N Buttenschøn; Jonas Bybjerg-Grauholm; Na Cai; Enrique Castelao; Jane Hvarregaard Christensen; Toni-Kim Clarke; Jonathan I R Coleman; Lucía Colodro-Conde; Baptiste Couvy-Duchesne; Nick Craddock; Gregory E Crawford; Cheynna A Crowley; Hassan S Dashti; Gail Davies; Ian J Deary; Franziska Degenhardt; Eske M Derks; Nese Direk; Conor V Dolan; Erin C Dunn; Thalia C Eley; Nicholas Eriksson; Valentina Escott-Price; Farnush Hassan Farhadi Kiadeh; Hilary K Finucane; Andreas J Forstner; Josef Frank; Héléna A Gaspar; Michael Gill; Paola Giusti-Rodríguez; Fernando S Goes; Scott D Gordon; Jakob Grove; Lynsey S Hall; Eilis Hannon; Christine Søholm Hansen; Thomas F Hansen; Stefan Herms; Ian B Hickie; Per Hoffmann; Georg Homuth; Carsten Horn; Jouke-Jan Hottenga; David M Hougaard; Ming Hu; Craig L Hyde; Marcus Ising; Rick Jansen; Fulai Jin; Eric Jorgenson; James A Knowles; Isaac S Kohane; Julia Kraft; Warren W Kretzschmar; Jesper Krogh; Zoltán Kutalik; Jacqueline M Lane; Yihan Li; Yun Li; Penelope A Lind; Xiaoxiao Liu; Leina Lu; Donald J MacIntyre; Dean F MacKinnon; Robert M Maier; Wolfgang Maier; Jonathan Marchini; Hamdi Mbarek; Patrick McGrath; Peter McGuffin; Sarah E Medland; Divya Mehta; Christel M Middeldorp; Evelin Mihailov; Yuri Milaneschi; Lili Milani; Jonathan Mill; Francis M Mondimore; Grant W Montgomery; Sara Mostafavi; Niamh Mullins; Matthias Nauck; Bernard Ng; Michel G Nivard; Dale R Nyholt; Paul F O'Reilly; Hogni Oskarsson; Michael J Owen; Jodie N Painter; Carsten Bøcker Pedersen; Marianne Giørtz Pedersen; Roseann E Peterson; Erik Pettersson; Wouter J Peyrot; Giorgio Pistis; Danielle Posthuma; Shaun M Purcell; Jorge A Quiroz; Per Qvist; John P Rice; Brien P Riley; Margarita Rivera; Saira Saeed Mirza; Richa Saxena; Robert Schoevers; Eva C Schulte; Ling Shen; Jianxin Shi; Stanley I Shyn; Engilbert Sigurdsson; Grant B C Sinnamon; Johannes H Smit; Daniel J Smith; Hreinn Stefansson; Stacy Steinberg; Craig A Stockmeier; Fabian Streit; Jana Strohmaier; Katherine E Tansey; Henning Teismann; Alexander Teumer; Wesley Thompson; Pippa A Thomson; Thorgeir E Thorgeirsson; Chao Tian; Matthew Traylor; Jens Treutlein; Vassily Trubetskoy; André G Uitterlinden; Daniel Umbricht; Sandra Van der Auwera; Albert M van Hemert; Alexander Viktorin; Peter M Visscher; Yunpeng Wang; Bradley T Webb; Shantel Marie Weinsheimer; Jürgen Wellmann; Gonneke Willemsen; Stephanie H Witt; Yang Wu; Hualin S Xi; Jian Yang; Futao Zhang; Volker Arolt; Bernhard T Baune; Klaus Berger; Dorret I Boomsma; Sven Cichon; Udo Dannlowski; E C J de Geus; J Raymond DePaulo; Enrico Domenici; Katharina Domschke; Tõnu Esko; Hans J Grabe; Steven P Hamilton; Caroline Hayward; Andrew C Heath; David A Hinds; Kenneth S Kendler; Stefan Kloiber; Glyn Lewis; Qingqin S Li; Susanne Lucae; Pamela F A Madden; Patrik K Magnusson; Nicholas G Martin; Andrew M McIntosh; Andres Metspalu; Ole Mors; Preben Bo Mortensen; Bertram Müller-Myhsok; Merete Nordentoft; Markus M Nöthen; Michael C O'Donovan; Sara A Paciga; Nancy L Pedersen; Brenda W J H Penninx; Roy H Perlis; David J Porteous; James B Potash; Martin Preisig; Marcella Rietschel; Catherine Schaefer; Thomas G Schulze; Jordan W Smoller; Kari Stefansson; Henning Tiemeier; Rudolf Uher; Henry Völzke; Myrna M Weissman; Thomas Werge; Ashley R Winslow; Cathryn M Lewis; Douglas F Levinson; Gerome Breen; Anders D Børglum; Patrick F Sullivan
Journal:  Nat Genet       Date:  2018-04-26       Impact factor: 38.330

10.  Profiling and Co-expression Network Analysis of Learned Helplessness Regulated mRNAs and lncRNAs in the Mouse Hippocampus.

Authors:  Chaoqun Li; Feifei Cao; Shengli Li; Shenglin Huang; Wei Li; Nashat Abumaria
Journal:  Front Mol Neurosci       Date:  2018-01-11       Impact factor: 5.639

View more
  27 in total

1.  Role of Long Noncoding RNA Gas5 in Cocaine Action.

Authors:  Haiyang Xu; Amber N Brown; Nicholas J Waddell; Xiaochuan Liu; Graham J Kaplan; Javed M Chitaman; Victoria Stockman; Rachel L Hedinger; Ryan Adams; Kristen Abreu; Li Shen; Rachael Neve; Zuoxin Wang; Eric J Nestler; Jian Feng
Journal:  Biol Psychiatry       Date:  2020-05-11       Impact factor: 13.382

2.  lncRNA MIR155HG Alleviates Depression-Like Behaviors in Mice by Regulating the miR-155/BDNF Axis.

Authors:  Zhang Huan; Zhu Mei; Huang Na; Ma Xinxin; Wang Yaping; Liu Ling; Wang Lei; Zhang Kejin; Liu Yanan
Journal:  Neurochem Res       Date:  2021-01-29       Impact factor: 3.996

Review 3.  Beyond the neuron: Role of non-neuronal cells in stress disorders.

Authors:  Flurin Cathomas; Leanne M Holt; Eric M Parise; Jia Liu; James W Murrough; Patrizia Casaccia; Eric J Nestler; Scott J Russo
Journal:  Neuron       Date:  2022-02-18       Impact factor: 17.173

Review 4.  The noncoding genome and hearing loss.

Authors:  Karen B Avraham; Lama Khalaily; Yael Noy; Lara Kamal; Tal Koffler-Brill; Shahar Taiber
Journal:  Hum Genet       Date:  2021-09-07       Impact factor: 4.132

5.  Sex-Specific Role for SLIT1 in Regulating Stress Susceptibility.

Authors:  Yentl Y van der Zee; Casey K Lardner; Eric M Parise; Philipp Mews; Aarthi Ramakrishnan; Vishwendra Patel; Collin D Teague; Marine Salery; Deena M Walker; Caleb J Browne; Benoit Labonté; Lyonna F Parise; Hope Kronman; Catherine J Penã; Angélica Torres-Berrío; Julia E Duffy; Laurence de Nijs; Lars M T Eijssen; Li Shen; Bart Rutten; Orna Issler; Eric J Nestler
Journal:  Biol Psychiatry       Date:  2021-02-27       Impact factor: 13.382

Review 6.  Large-Scale Transcriptomics Studies Provide Insight Into Sex Differences in Depression.

Authors:  Marianne L Seney; Jill Glausier; Etienne Sibille
Journal:  Biol Psychiatry       Date:  2021-01-08       Impact factor: 13.382

7.  Sex-specific effects of social defeat stress on miRNA expression in the anterior BNST.

Authors:  Pei X Luo; Claire E Manning; Joe N Fass; Alexia V Williams; Rebecca Hao; Katharine L Campi; Brian C Trainor
Journal:  Behav Brain Res       Date:  2020-12-22       Impact factor: 3.332

8.  Molecular omics resources should require sex annotation: a call for action.

Authors:  Kamila M Bond; Margaret M McCarthy; Joshua B Rubin; Kristin R Swanson
Journal:  Nat Methods       Date:  2021-06       Impact factor: 28.547

9.  Sperm transcriptional state associated with paternal transmission of stress phenotypes.

Authors:  Ashley M Cunningham; Deena M Walker; Aarthi Ramakrishnan; Marie A Doyle; Rosemary C Bagot; Hannah M Cates; Catherine J Peña; Orna Issler; Casey Lardner; Caleb Browne; Scott J Russo; Li Shen; Eric J Nestler
Journal:  J Neurosci       Date:  2021-06-07       Impact factor: 6.167

10.  The Molecular Basis of Depression: Implications of Sex-Related Differences in Epigenetic Regulation.

Authors:  Ayako Kawatake-Kuno; Toshiya Murai; Shusaku Uchida
Journal:  Front Mol Neurosci       Date:  2021-07-01       Impact factor: 5.639

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.