| Literature DB >> 32299427 |
Kanetoshi Takebayashi1, Kaei Nasu2,3, Mamiko Okamoto1, Yoko Aoyagi1, Tomoko Hirakawa1, Hisashi Narahara1.
Abstract
BACKGROUND: A number of microRNAs are aberrantly expressed in endometriosis and are involved in its pathogenesis. Our previous study demonstrated that has-miR-100-5p expression is enhanced in human endometriotic cyst stromal cells (ECSCs). The present study aimed to elucidate the roles of has-miR-100-5p in the pathogenesis of endometriosis.Entities:
Keywords: Endometriosis; Hsa-miR-100-5p; Invasion; Matrix metallopeptidase 1; SMARCD1
Mesh:
Substances:
Year: 2020 PMID: 32299427 PMCID: PMC7161200 DOI: 10.1186/s12958-020-00590-3
Source DB: PubMed Journal: Reprod Biol Endocrinol ISSN: 1477-7827 Impact factor: 5.211
Fig. 1Downstream signaling pathway of hsa-miR-100-5p in NESCs. A gene expression microarray and pathway analyses of hsa-miR-100-5p-transfected NESCs revealed that hsa-miR-100-5p upregulated the motility of NESCs by direct inhibition of SMARCD1 expression followed by MMP1 activation. SMARCD1, SWItch/sucrose non-fermentable-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1; MMP1, matrix metallopeptidase 1; NESCs, normal endometrial stromal cells
Fig. 2hsa-miR-100-5p expression in NESCs and ECSCs. The relative hsa-miR-100-5p levels in ECSCs (n = 6) were significantly higher than those in the NESCs (n = 6). *p < 0.0005 vs. NESCs (Student’s t-test). Data are shown as the mean ± SD. ECSCs, endometriotic cyst stromal cells; NESCs, normal endometrial stromal cells
Fig. 3Effects of hsa-miR-100-5p transfection on the downstream target molecule expression in NESCs. (a) hsa-miR-100-5p expression after precursor miRNA transfection. Note that the vertical axis is expressed as a logarithmic scale. (b) SMARCD1 mRNA expression. (c) MMP1 mRNA expression. (d) Active MMP1 protein expression. *p < 0.05, **p < 0.005, #p < 0.0005 vs. controls (Student’s t-test). MMP1, matrix metallopeptidase 1; NESCs, normal endometrial stromal cells; SMARCD1, SWItch/sucrose non-fermentable-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
List of mRNAs aberrantly expressed in miR-100-5p-transfected NESCs
| Gene family | Gene symbol | Control signal | miR-100 precursor signal | Z-score | Ratio |
|---|---|---|---|---|---|
| (A) Upregulated mRNAs | |||||
| Cytokine | 312.22 | 1041.65 | 6.87 | 4.32 | |
| 1034.43 | 2782.35 | 5.98 | 3.11 | ||
| 128.77 | 261.89 | 3.80 | 2.46 | ||
| 838.00 | 1737.49 | 4.13 | 2.17 | ||
| Growth factor | 817.37 | 461.26 | −4.41 | 0.45 | |
| Peptidase | 49,499.07 | 74,041.18 | 7.47 | 2.40 | |
| 70.96 | 120.43 | 2.27 | 2.40 | ||
| Enzyme | 1259.03 | 3722.52 | 6.99 | 3.81 | |
| 1067.64 | 1867.57.94 | 4.18 | 2.08 | ||
| 440.73 | 714.19 | 3.88 | 2.18 | ||
| Transcription regulator | 2487.25 | 6026.87 | 5.85 | 2.87 | |
| 48.29 | 98.99 | 3.02 | 2.53 | ||
| 147.71 | 291.50 | 3.05 | 2.02 | ||
| Transmembrane receptor | 1383.58 | 2680.82 | 4.48 | 2.21 | |
| 6699.21 | 13,211.87 | 4.72 | 2.04 | ||
| Transporter | 134.70 | 270.47 | 3.29 | 2.12 | |
| 1166.81 | 1994.48 | 4.09 | 2.03 | ||
| Other | 41.72 | 123.42 | 4.64 | 3.54 | |
| 192.01 | 593.66 | 5.84 | 3.20 | ||
| 260.83 | 736.98 | 5.72 | 2.99 | ||
| 196.72 | 412.79 | 4.30 | 2.80 | ||
| 4713.79 | 9455.68 | 5.88 | 2.76 | ||
| 225.65 | 451.23 | 3.82 | 2.41 | ||
| 752.91 | 1839.06 | 4.64 | 2.35 | ||
| 469.66 | 816.51 | 4.11 | 2.27 | ||
| 47.52 | 91.03 | 2.61 | 2.24 | ||
| 440.11 | 805.17 | 4.01 | 2.18 | ||
| 1643.31 | 3433.27 | 4.56 | 2.15 | ||
| 104.93 | 162.95 | 3.20 | 2.15 | ||
| 10,269.42 | 17,744.24 | 4.89 | 2.12 | ||
| Other | 488.37 | 852.48 | 3.68 | 2.05 | |
| 1403.18 | 2829.40 | 4.28 | 2.01 | ||
| Null | 38.79 | 110.21 | 3.88 | 3.33 | |
| (B) Downregulated mRNAs | |||||
| Enzyme | 286.50 | 128.94 | −5.76 | 0.26 | |
| 190.28 | 88.66 | −4.24 | 0.38 | ||
| 1404.19 | 713.49 | −5.10 | 0.40 | ||
| Ion channel | 118.10 | 32.10 | −4.34 | 0.24 | |
| 151.44 | 53.14 | −5.41 | 0.28 | ||
| 1074.65 | 563.34 | −4.14 | 0.47 | ||
| Kinase | 239.75 | 121.71 | −3.31 | 0.49 | |
| Peptidase | 3143.19 | 1023.39 | −6.74 | 0.33 | |
| 239.21 | 117.14 | −3.26 | 0.47 | ||
| Phosphatase | 184.80 | 73.50 | −4.33 | 0.34 | |
| Transcription regulator | 2210.80 | 932.50 | −5.34 | 0.43 | |
| 288.00 | 135.67 | −3.32 | 0.47 | ||
| Transporter | 9337.60 | 3682.26 | −6.29 | 0.40 | |
| Other | 3173.94 | 780.35 | −8.19 | 0.27 | |
| 125.86 | 59.79 | −3.82 | 0.43 | ||
| 161.28 | 71.97 | −3.74 | 0.43 | ||
| 568.38 | 289.31 | −4.34 | 0.46 | ||
| 112.70 | 61.15 | −3.01 | 0.46 | ||
| 3229.37 | 1492.02 | −4.80 | 0.47 | ||
| 4328.05 | 2074.04 | −4.65 | 0.47 | ||
| 748.62 | 362.73 | −4.11 | 0.48 | ||
| 398.87 | 187.27 | −3.37 | 0.48 | ||
| 1560.93 | 839.74 | −3.46 | 0.49 | ||
| 1351.65 | 687.71 | −3.46 | 0.49 | ||
| Null | 144.45 | 54.61 | −3.92 | 0.35 | |
| 35.66 | 16.12 | −2.11 | 0.42 | ||
| 120.26 | 61.28 | −3.53 | 0.43 | ||
ABCA1 ATP-binding cassette, sub-family A, member 1; ADAM19 ADAM metallopeptidase domain 19; ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5; ANGPTL4 angiopoietin-like 4 transcript variant 1; AREG amphiregulin; ASPH aspartate beta-hydroxylase, transcript variant 3; ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1; BATF3 basic leucine zipper transcription factor, ATF-like 3; BAZ2A bromodomain adjacent to zinc finger domain, 2A; BCAP29 B-cell receptor-associated protein 29, transcript variant 2; BMP2 bone morphogenetic protein 2; CCL2 chemokine ligand 2; CEND1 cell cycle exit and neuronal differentiation 1; CGA glycoprotein hormones, alpha polypeptide, transcript variant 2; CIDEC cell death-inducing DFFA-like effector c, transcript variant 3; CLDN11 claudin 11, transcript variant 1; CPXM1 carboxypeptidase X, member 1, transcript variant 1; CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, transcript variant 1; CYBRD1 cytochrome b reductase 1, transcript variant 1; DEPTOR DEP domain containing MTOR-interacting protein, transcript variant 1; DGCR2 DiGeorge syndrome critical region gene 2, transcript variant 1; DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11; EMC10 ER membrane protein complex subunit 10, transcript variant 1; EPDR1 ependymin related 1, transcript variant 1; ERLIN2 ER lipid raft associated 2, transcript variant 1; FAM131B family with sequence similarity 131, member B, transcript variant a; FGFR3 fibroblast growth factor receptor 3, transcript variant 1; HSD17B2 hydroxysteroid (17-beta) dehydrogenase 2; IL11 interleukin 11; INMT indolethylamine N-methyltransferase, transcript variant 2; ITGA6 integrin, alpha 6, transcript variant 2; KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2, transcript variant 1; KCTD10 potassium channel tetramerization domain containing 10; KCTD4 potassium channel tetramerization domain containing 4; LIF leukemia inhibitory factor, transcript variant 1; LOC102723946, Zinc finger protein 695; LOC728392, uncharacterized LOC728392; LPPR4 lipid phosphate phosphatase-related protein type 4, transcript variant 1; MMP1 matrix metallopeptidase 1, transcript variant 1; MPZL3 myelin protein zero-like 3, transcript variant 1: MTAP methylthioadenosine phosphorylase; PALM3 paralemmin 3; PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha, transcript variant 1; PLCH1 phospholipase C, eta 1, transcript variant 2; PROSER2-AS1 PROSER2 antisense RNA 1; PVRL2 poliovirus receptor-related 2, transcript variant delta; RDX radixin, transcript variant 3; RP2 retinitis pigmentosa 2; SCML1 sex comb on midleg-like 1, transcript variant 1; SLC16A14 solute carrier family 16, member 14; SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant 2; SNRPC small nuclear ribonucleoprotein polypeptide C, transcript variant 1; STBD1 starch binding domain 1; SUDS3 suppressor of defective silencing 3 homolog; SWAP70 SWAP switching B-cell complex 70 kDa subunit, transcript variant 1; TFPI2 tissue factor pathway inhibitor 2, transcript variant 1; TMEM30A transmembrane protein 30A, transcript variant 1; TUBB2B tubulin, beta 2B class IIb; UBE2V1 ubiquitin-conjugating enzyme E2 variant 1, transcript variant 4; ZBED2 zinc finger, BED-type containing 2
Fig. 4Effects of SMARCD1 siRNA transfection on the MMP1 mRNA expression in NESCs. (a) SMARCD1 mRNA expression after SMARCD1 siRNA transfection. (b) MMP1 mRNA expression. *p < 0.05, **p < 0.005 vs. controls (Student’s t-test). MMP1, matrix metallopeptidase 1; NESCs, normal endometrial stromal cells; SMARCD1, SWItch/sucrose non-fermentable-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
Fig. 5Effects of hsa-miR-100-5p transfection on the motility of NESCs. (a) Results of transwell invasion assay. (b) Representative photographs of transwell invasion assay. (c) Results of in-vitro wound repair assay. (d) Representative photographs of in vitro wound repair assay. *p < 0.05, **p < 0.0005 vs. controls (Student’s t-test). NESCs, normal endometrial stromal cells