Cell trackers are fluorescent chemical tools that facilitate imaging and tracking cells within live organisms. Despite their versatility, these dyes lack specificity, tend to leak outside of the cell, and stain neighboring cells. Here, we report a dual-activatable cell tracker for increased spatial and temporal staining control, especially for single-cell tracking. This probe overcomes the typical problems of current cell trackers: off-target staining, high background signal, and leakage from the intracellular medium. Staining with this dye is not cytotoxic, and it can be used in sensitive primary cells. Moreover, this dye is resistant to harsh fixation and permeabilization conditions and allows for multiwavelength studies with confocal microscopy and fluorescence-activated cell sorting. Using this cell tracker, we performed in vivo homing experiments in mice with primary splenocytes and tracked a single cell in a heterogeneous, multicellular culture environment for over 20 h. These experiments, in addition to comparative proliferation studies with other cell trackers, demonstrated that the signal from this dye is retained in cells for over 72 h after photoactivation. We envision that this type of probes will facilitate the analysis of single-cell behavior and migration in cell culture and in vivo experiments.
Cell trackers are fluorescent chemical tools that facilitate imaging and tracking cells within live organisms. Despite their versatility, these dyes lack specificity, tend to leak outside of the cell, and stain neighboring cells. Here, we report a dual-activatable cell tracker for increased spatial and temporal staining control, especially for single-cell tracking. This probe overcomes the typical problems of current cell trackers: off-target staining, high background signal, and leakage from the intracellular medium. Staining with this dye is not cytotoxic, and it can be used in sensitive primary cells. Moreover, this dye is resistant to harsh fixation and permeabilization conditions and allows for multiwavelength studies with confocal microscopy and fluorescence-activated cell sorting. Using this cell tracker, we performed in vivo homing experiments in mice with primary splenocytes and tracked a single cell in a heterogeneous, multicellular culture environment for over 20 h. These experiments, in addition to comparative proliferation studies with other cell trackers, demonstrated that the signal from this dye is retained in cells for over 72 h after photoactivation. We envision that this type of probes will facilitate the analysis of single-cell behavior and migration in cell culture and in vivo experiments.
Fluorescent
cell trackers are
powerful tools that enable direct visualization of biological processes
like cell proliferation, cell migration, and cell–cell interactions.[1,2] Fluorescent markers can be either small-molecule dyes or fluorescent
proteins. Specific cell types can be labeled with genetically encoded
fluorescent proteins (e.g., GFP and YFP).[3] Additional control over labeling can be achieved using fluorescent
proteins like photoactivatable GFP[4] and
photoconvertible Kaede[1,5] and Kikume.[6] These photoconvertible proteins are green fluorescent but
undergo a bathochromic shift in emission wavelength upon irradiation
with UV light.[7] The ability to control
the emission of the protein by light irradiation allows for advanced
applications, for example, in kinetic studies of cellular migration.[8]Despite the usefulness of photoconvertible
fluorescent proteins,
their application is limited by the availability of the transgenic
organism, and gene knockout comparative studies increase substantially
the complexity of the experimental setup. Furthermore, these proteins
often lose their fluorescence following fixation and permeabilization
protocols.[9] Compared to genetically encoded
fluorescent proteins,[10] small-molecule
dyes benefit from high quantum yields,[11] photostability,[12] and chemical tuning
of their properties.[13] On the other hand,
they must also fulfill multiple requirements, including membrane permeability,
uniform cellular staining, fluorogenic response upon intracellular
targeting, intracellular retention, and low cytotoxicity.[14,15]Commercial cell proliferation dyes, such as eFluor670 and
CellTrace
Violet (CTV), are used to quantify cell divisions and track cell populations
in live animals.[16] Their chemical structures
contain functional groups that can form irreversible bonds with reactive
nucleophiles. Nevertheless, eFluor670 and CTV are always in a fluorescent
state. This feature can cause high background fluorescence and false
positive signals if the molecule accumulates in an off-target location.[17] In contrast, other cell trackers like carboxyfluorescein
diacetate succinimidylester (CFDA-SE) react with intracellular carboxylesterases
(CEs) to give a bright fluorescein reaction product.[18] Succinimidyl groups can covalently bind to intracellular
nucleophiles; therefore, cell trackers like CFDA-SE can be retained
inside cells, even after cellular division.[19,20] Chloromethyl containing probes, like chloromethyl fluorescein diacetate
(CMFDA), also form irreversible bonds to intracellular targets containing
free thiols, including glutathione.[21] Even
though this strategy enhances selectivity toward specific intracellular
nucleophiles, irreversible cross-linking to reduced glutathione can
affect the redox balance of the cell and affect its function.[22,23] Both of these fluorescein derivatives are protected with acetyl
groups, which makes them very labile toward active CEs. Particularly
under inflammatory conditions, immune cells secrete abundant cytotoxic
products that can lead to cell death with the subsequent release of
intracellular components, including CEs, to the extracellular space.[24,25] This condition may lead to the hydrolysis of acetyl-containing dyes
and contribute to unspecific fluorescence in the tissue.In
this study, we report a probe that combines the best features
of small-molecule dyes and photoconvertible fluorescent proteins.
This dual-activatable cell tracker (DACT) relies on activation by
both intracellular CEs and light. The fluorescent product is bright
and binds covalently to intracellular nucleophiles, giving a highly
durable signal that is resistant toward harsh fixation and permeabilization
conditions. DACT is simple to use and does not require any genetic
manipulation. Moreover, it is compatible with highly sensitive primary
cells without inducing considerable cytotoxicity. Finally, we demonstrate
the benefits of spatiotemporal control of DACT by implementing inverted
fluorescence recovery after photobleaching (iFRAP) to stain single
splenocytes selectively in heterogeneous cell mixtures and track their
location over a long time.[26]
Results and Discussion
Design,
Synthesis, and Properties of DACTs
Seeking
to create a probe that could stain the intracellular region of cells
selectively and robustly, we designed a library of DACTs taking into
consideration five stages of a live-cell labeling experiment (Figure ). First, we envisioned
that membrane permeability could be facilitated by an initial nonfluorescent
form of the DACT that is stable and relatively lipophilic, but noncytotoxic
(Figure A, I). Upon
accumulation of this DACT within the intracellular space, active CEs
present in the cell would hydrolyze the ester moiety of DACT to give
a nonemissive, preactivated form (Figure A, II).[27] The
main difference between the nonhydrolyzed and hydrolyzed DACT is the
electronic character of the xanthene core (Figure B). Nonhydrolyzed DACT in the extracellular
space has an electron poor xanthene core, and photolysis with UV light
induces an intramolecular rearrangement that produces a nonfluorescent
photoproduct. Hydrolyzed DACT in the intracellular space has an electron-rich
xanthene core, and photolysis with UV light induces the formation
of a bright fluorescent product that forms a cross-link with intracellular
nucleophiles (Figure A, III).[27] Therefore, preactivating DACT
with intracellular CEs is a crucial step that determines the outcome
of the photoreaction and provides selectivity for intracellular labeling.
Using the emission of the cross-linked photoproduct (λmax = 560 nm), cells can be detected and tracked with confocal microscopy
(Figure A, IV) or
quantified and categorized by multiwavelength fluorescence assisted
cell sorting (FACS; Figure A, V).
Figure 1
Labeling experiment and mechanism of DACT. (A) Five stages
of experimental
design and how DACTs respond to the stimulus of each step. (B) Structures
and photochemical mechanism of activation of DACT probes. PE = Phycoerythrin.
Labeling experiment and mechanism of DACT. (A) Five stages
of experimental
design and how DACTs respond to the stimulus of each step. (B) Structures
and photochemical mechanism of activation of DACT probes. PE = Phycoerythrin.We envisioned that we could modulate the reactivity
of the probe
toward CEs by variation of the bulkiness of the acyl group R (Figure B). Therefore, we
prepared a small library of DACTs 1–4 of increasing steric bulk. Each of these compounds was obtained
in a one-step synthetic procedure starting from the diazoindanone
rhodol precursor 5 and the corresponding acyl chlorides
under basic conditions (Figure S1).[27] The relative reactivity of DACTs 1–4 toward intracellular CEs was tested in HeLa
cells using confocal microscopy (Figure S2 A,B). The susceptibility of DACTs toward hydrolysis by CEs correlated
well with the bulkiness of the ester group (Figure S2), similarly to what has been observed for the hydrolysis
of other esters in live cells and tissues.[28] This trend was further confirmed by FACS (Figure S3).DACTs are diazoindanone xanthene dyes that are transformed
into
a ketene intermediate that can be trapped by intracellular nucleophiles.[27,29] To prove that DACTs also label intracellular structures covalently,
we tested whether DACTs diffuse out of the cell after photoactivation.
Even after 27 h of incubation, the intracellular fluorescent signal
was detectable for all DACT derivatives (Figure S4). Moreover, we irradiated a small intracellular region of
interest (ROI) in an iFRAP experiment and measured a line profile
of fluorescence intensity within the irradiated ROI (Figure S5). No significant change in the position of intracellular
fluorescence was observed over time for DACTs. In addition, DACTs
stayed attached to their intracellular targets after the photoirradiation
step (Figure S6). To determine whether
cell staining with DACT-1 (Figure A) is as homogeneous and persistent as with
commonly used dyes, we conducted imaging experiments with cell trackers
CTV and CFDA-SE and diffusion experiments with eFluor670 (Figure C and Figure S6). Dyes CTV and CFSE showed homogeneous
labeling of the cell, but the intensity of CTV decreased significantly
after more than 12 h (Figure C). DACT-1, in contrast, did not decrease in
fluorescence intensity significantly over this period. In contrast,
confocal microscopy images of cells stained with eFluor670 revealed
a punctate pattern typical of endosomal uptake and/or exocytosis even
after short incubation times (Figure S6). In general, DACT-1 performs similarly or better than
established cell trackers in terms of homogeneity of staining (Figure C).
Figure 2
Fluorescent signal durability
of cells stained with DACT-1, CTV, and CFDA-SE with varying
incubation times after staining
protocol. (A) Schematic representation of the intracellular reaction
of DACTs. (B) Confocal images obtained from treating HeLa cells with
DACT-1 (10 μM) for 10 min. Photoactivation and
read-out were achieved using 405 nm (1 s, 30 mW) and 561 nm lasers
(0.5 s, 120 mW), respectively. (C) Comparison of fluorescence images
of cells incubated with DACT-1 (10 μM for 30 min
and photoirradiated), CTV, or CFDA-SE (in a solution of 5 μM
dye in FluoroBright, for 30 min) individually, washed and imaged after
10 min and 1, 12, and 27 h using confocal microscopy. Representative
images from three independent experiments are displayed. Scale bars
= 10 μm.
Fluorescent signal durability
of cells stained with DACT-1, CTV, and CFDA-SE with varying
incubation times after staining
protocol. (A) Schematic representation of the intracellular reaction
of DACTs. (B) Confocal images obtained from treating HeLa cells with
DACT-1 (10 μM) for 10 min. Photoactivation and
read-out were achieved using 405 nm (1 s, 30 mW) and 561 nm lasers
(0.5 s, 120 mW), respectively. (C) Comparison of fluorescence images
of cells incubated with DACT-1 (10 μM for 30 min
and photoirradiated), CTV, or CFDA-SE (in a solution of 5 μM
dye in FluoroBright, for 30 min) individually, washed and imaged after
10 min and 1, 12, and 27 h using confocal microscopy. Representative
images from three independent experiments are displayed. Scale bars
= 10 μm.
Cell Tracking and Profiling
Using DACT-1 in Vivo
After demonstrating
the performance of DACTs as cell trackers
in HeLa cells, we focused on their application in primary cells and
whole animals. We chose to work with primary murine splenocytes, which
are highly sensitive cells. As the fluorescent marker, we decided
to use DACT-1 because it produced the brightest intracellular
signal after short incubation times. To assess the toxicity induced
by irradiation and the dye itself, freshly isolated murine splenocytes
were subjected to different UV irradiation times (t = 0, 1, 2, 3, 5 min) and DACT-1 concentrations (1,
10, 20 μM). Toxicity was assessed by staining with Zombie Aqua,
a dye that detects membrane permeability, and Annexin V, an indicator
of apoptosis, using FACS (Figures S7 and S8). Ten micromoles of DACT-1 and 1.5 min of UV exposure
resulted in optimal staining with minimal toxicity (Figures S9 and S10), and these conditions were selected for
all subsequent experiments.Because splenocytes comprise several
cell types, we examined whether DACT-1 would stain the
whole population of splenocytes homogeneously (Figure S11). For this purpose, splenocytes were incubated
with DACT-1 for 30 min at 37 °C and irradiated (405
nm, 1.5 min). The stained splenocytes were mixed in a ratio of 1:1
with unstained splenocytes, and the mixtures were incubated with the
corresponding antibodies (30 min at 4 °C) to distinguish dendritic
cells and CD4 and CD8 T cells by multicolor FACS analysis. This experiment
revealed that cells stained with DACT-1 were consistently
distinguishable from nonlabeled cells. Moreover, the fact that in
all cell types analyzed the ratio of DACT-1+ to DACT-1– cells remained approximately
1:1 suggests no immediate toxicity of the labeling procedure in primary
cells (Figure S11).To evaluate further
the innocuousness of DACT-1 in
primary cells, we performed an in vivo homing study
to assess cell functionality. A 1:1 mixture of singly (eFluor670)
and doubly (eFluor670 and DACT-1) labeled splenocytes
was injected into the tail vein of a mouse (Figure A). Splenocytes primarily consist of T cells
and B cells. The latter are well-known to recirculate constantly between
blood and secondary lymphoid organs, such as lymph nodes (LNs), which
they rapidly enter by transmigrating through high endothelial venules.[30] To analyze the presence of the adoptively transferred
cells in lymphoid organs, auricular, axillary and inguinal LNs were
harvested after 19 h, processed, and analyzed by FACS. This analysis
detected a sizable population of the transferred cells in all LNs
and revealed that the 1:1 input ratio of eFluor670+DACT-1– and eFluor670+DACT-1+ was maintained in all harvested LNs (Figure B,C). This result demonstrates
that DACT-1 staining does not interfere with the active
migration of splenocytes in a live animal.
Figure 3
In vivo homing assay confirmation of no functional
differences in splenocytes labeled with DACT-1 compared
to splenocytes labeled with eFluor670. (A) Representative FACS analysis
of eFluor670+DACT-1– and
eFluor670+DACT-1+ splenocytes (1:1
ratio). (B) Representative FACS analysis of LN cell suspensions showing
percentages of labeled cells. (C) Analysis of ratios of DACT-1+ to DACT-1– cells
in LNs; values were determined using the gating strategies displayed
in B. Pooled data from three independent experiments are displayed.
Results were normalized to the input and displayed as individual data
points (n = 3) and mean (line).
In vivo homing assay confirmation of no functional
differences in splenocytes labeled with DACT-1 compared
to splenocytes labeled with eFluor670. (A) Representative FACS analysis
of eFluor670+DACT-1– and
eFluor670+DACT-1+ splenocytes (1:1
ratio). (B) Representative FACS analysis of LN cell suspensions showing
percentages of labeled cells. (C) Analysis of ratios of DACT-1+ to DACT-1– cells
in LNs; values were determined using the gating strategies displayed
in B. Pooled data from three independent experiments are displayed.
Results were normalized to the input and displayed as individual data
points (n = 3) and mean (line).One important limitation of some commercially available dyes and
most fluorescent proteins is the loss of signal when cells are subjected
to fixation and permeabilization protocols.[9,14] These
procedures are not only essential for sample preservation but also
for other applications, such as electron microscopy[31] or intracellular staining of proteins using antibodies.[32] Therefore, we tested the robustness of DACT-1 under these conditions. Splenocytes labeled with DACT-1 were mixed with unlabeled cells in a 1:1 ratio. The resulting
mixture was fixed and permeabilized using a kit for staining nuclear
transcription factors, a particularly harsh protocol. After FACS analysis,
the ratio of DACT-1+ to DACT-1– was maintained, indicating that DACT-1 was retained and that the fluorescent signal was not lost during
fixation (Figure S12). These results were
further confirmed and contrasted by comparing the median fluorescence
intensity (MFI) of DACT-1, CTV, CFDA-SE, and eFluor670
before and after fixation and permeabilization of the cells (Figure S13). Notably, nearly 80% of the fluorescence
signal in cells stained with CFDA-SE was lost after the fixation and
permeabilization protocol. For cells stained with DACT-1, CTV, and eFluor670, no significant change was observed (Figure S13), demonstrating that these dyes are
better suited for this kind of experiment.
DACT-1 Is
Not Transferred between Cells after Photoactivation
Although
some commercially available cell trackers are retained
inside the cell, noticeable intercellular transfer occurs with some
dyes, eroding their specificity in cell tracking experiments.[18] Therefore, we constructed a cell interaction
model to compare dye leakage of splenocytes labeled with either DACT-1 or the popular cell tracking dye eFluor670. The model consisted
of a conditionally immortalized lymphatic endothelial cell (imLEC)
monolayer to which splenocytes were added to study cell crawling under
diverse conditions.[33] Splenocytes were
stained separately with eFluor670 (5 μM), DACT-1 (10 μM), or a 1:1 mixture of eFluor670 and DACT-1. After irradiation and incubation for 19 h at 37 °C on confluent
imLEC monolayers, the cells were analyzed by confocal microscopy (Figure and Figure S14). The dyes eFluor670 and DACT-1 were detected in the 647 and 561 nm channels, respectively,
and no bleed-through between imaging channels was observed (Figure A,B). The signal
measured in the imLEC layer at 647 nm revealed that tracker eFluor670
had leaked significantly from splenocytes into the imLEC monolayer
(Figure A, white arrow).
In contrast, imaging at 561 nm gave a signal only in splenocytes and
not in the imLEC monolayer (Figure B). The same result was observed in splenocytes that
had been treated with both dyes simultaneously (Figure C). Additional analysis using FACS revealed
that 14% of the imLEC population contained eFluor670 dye, whereas
no DACT-1 dye was found in imLECs (Figure D,E). Similar leakage values were obtained
for conditions incubated with a 1:1 mixture of stained splenocytes
(eFluor670+ and DACT-1+). This
result confirmed that, whereas eFluor670 leaked significantly from
stained splenocytes, DACT-1 displayed no detectable leakage
(Figure E and Figure S14). Similar FACS experiments revealed
that DACT-1 was comparable to CTV and slightly superior
to CFDA-SE (Figure S15). These results
demonstrate that DACT-1 performs as well as CTV and better
than eFluor607 or CFDA-SE in terms of nonspecific dye transfer between
different cell types.
Figure 4
Minimal DACT-1 intercellular transfer in
coculture
studies. Representative images of splenocytes labeled with DACT-1 (A), eFluor670 (B), and mixed in a 1:1 ratio (C), incubated
on imLECs for 19 h. Examples of splenocytes are indicated with yellow
arrows, and examples of leakage to ECs are shown with white arrows.
Scale bars = 50 μm in A, 5 μm in C. (D) Representative
FACS analysis of coculture studies of CD31+ imLECs (Figures S14, S15). (E) Analysis of the total
percentage of imLECs stained with DACT-1 and eFluor670
caused by intercellular transfer of dyes from splenocytes. Data are
plotted as mean ± SEM (n = 3 independent experiments
are pooled).
Minimal DACT-1 intercellular transfer in
coculture
studies. Representative images of splenocytes labeled with DACT-1 (A), eFluor670 (B), and mixed in a 1:1 ratio (C), incubated
on imLECs for 19 h. Examples of splenocytes are indicated with yellow
arrows, and examples of leakage to ECs are shown with white arrows.
Scale bars = 50 μm in A, 5 μm in C. (D) Representative
FACS analysis of coculture studies of CD31+ imLECs (Figures S14, S15). (E) Analysis of the total
percentage of imLECs stained with DACT-1 and eFluor670
caused by intercellular transfer of dyes from splenocytes. Data are
plotted as mean ± SEM (n = 3 independent experiments
are pooled).
DACT-1 Signal
Is Retained in Cells for a Long Time
To evaluate further
the durability of the signal in primary cells,
we performed proliferation assays with labeled T cells.[18] To this end, we performed experiments with bone
marrow derived dendritic cells (BM-DCs), which when presenting a peptide
derived from ovalbumin (OVA) on MHCII are able to stimulate the proliferation
of T cells expressing a transgenicOVA-specific αβ-T cell
receptor (OT-II T cells).[34] Assuming that
the T cells are evenly labeled initially and the dye is efficiently
retained, FACS analysis would be expected to reveal proliferation
peaks over several T cell division cycles, corresponding to successive
reductions of fluorescence by 50% due to cell divisions. OT-II T cells
were labeled with DACT-1, CTV, CFDA-SE, or eFluor670
and subsequently incubated for 72 h with BM-DCs and an MHCII-binding
peptide derived from OVA. Four cell generations were clearly distinguished
for all nonphotoactivatable dyes (CTV, CFDA-SE, and eFluor670). For
cells stained with DACT-1, peaks corresponding to the
different cell generations were less clearly resolved, presumably
because of the low number of fluorescent molecules obtained from the
photoactivation step (Figure S16). Nevertheless,
we could still distinguish four generations of cells employing DACT-1 staining, demonstrating that the dye signal was retained
and not lost in these cells. During these experiments, we noticed
that the percentage of proliferated cells stained with CTV was slightly
lower than for other staining conditions (Figure S17).
Long-Term, Single-Cell Tracking
Tracking single cells
in complex heterogeneous mixtures enables the characterization of
cell–cell interactions and cell migration with increased temporal
dynamics. These experiments, however, are often limited by leakage,
photobleaching, or toxicity of the fluorescent marker. To test DACT-1 in a long-term, single-cell tracking experiment, we prepared
a confluent monolayer of imLECs and added unstained splenocytes. This
heterogeneous mixture of cells was incubated with DACT-1 (10 μM). Without any further washing step, we selected a single
splenocyte and irradiated it in an iFRAP experiment to photoconvert
DACT-1 only in that selected cell (Figure A). A 24 h time-lapse acquisition revealed
the displacement of the splenocyte throughout the field of view (Figure B and Movie 1). We were able to monitor up to 12 splenocytes
simultaneously in different fields of view over that time frame. We
observed splenocytes crawling on the surface of the imLECs and detected
a selected single splenocyte in the presence of other nonfluorescent
cells (Figure C, Movie 2). These results demonstrate the suitability
of DACT-1 staining for tracking single cells over time
without any need to genetically modify the organism or isolate cells
for independent staining.
Figure 5
Long-term tracking of a single splenocyte on
an imLEC monolayer.
(A) Brightfield image of a splenocyte (dashed green line) on an imLEC
monolayer. Fluorescent intensity in the 561 nm channel (5 s, 120 mW)
recorded before and after iFRAP (405 nm, 1 s, 30 mW). (B) Time lapse
of the ROI (magenta dotted square) displayed in panel A of the same
lymphocyte over the course of 20 h. (C) Example of a splenocyte selected
in brightfield mode, activated with iFRAP and tracked over 24 h (same
irradiation conditions). Crawling of the splenocyte is observed between
16 and 24 h (yellow arrows). Representative data from two out of 12
experiments are shown. Scale bars = 5 μm.
Long-term tracking of a single splenocyte on
an imLEC monolayer.
(A) Brightfield image of a splenocyte (dashed green line) on an imLEC
monolayer. Fluorescent intensity in the 561 nm channel (5 s, 120 mW)
recorded before and after iFRAP (405 nm, 1 s, 30 mW). (B) Time lapse
of the ROI (magenta dotted square) displayed in panel A of the same
lymphocyte over the course of 20 h. (C) Example of a splenocyte selected
in brightfield mode, activated with iFRAP and tracked over 24 h (same
irradiation conditions). Crawling of the splenocyte is observed between
16 and 24 h (yellow arrows). Representative data from two out of 12
experiments are shown. Scale bars = 5 μm.
Summary and Conclusions
In this report, we described
DACTs, a family of photoactivatable, photo-cross-linking cell trackers.
These probes combine the best features of photoconvertible proteins
and small-molecule dyes, including a bright fluorescent signal, low
cytotoxicity, intracellular dye retention, and simple application
that does not require complicated genetic engineering approaches.We demonstrated that these DACT probes are preactivated by intracellular
CEs and that the kinetics of this preactivation can be tuned. This
way, an appropriate DACT could even be selected for experimental conditions
in which substantial CEs might be present. Active esterases can be
found throughout an entire organism,[35] and
studies have detected the presence of active CEs both in human and
animal plasma.[36] It is believed that secretion
of active CEs is mainly caused by liver microsomes,[37] and recent studies have revealed the unique overexpression
of hCEII in cancerous tissue,[38,39] a characteristic feature
used for pro-drug activation. We therefore propose that adapting the
protecting group of DACT can increase resistance toward CE hydrolysis
in tissue and circulating blood, enhance the selectivity toward specific
substrates, and prevent preactivation of the probe in nondesired locations.
After preactivation by CEs in the intracellular compartment, photoactivation
of DACTs generates a photo-cross-linked fluorescent product. This
covalently bound fluorophore is bright and does not leave the cell
even after many hours. Moreover, DACT staining was compatible with
harsh fixation and permeabilization procedures often necessary for
staining intracellular proteins and profiling cells by multiwavelength
FACS.Importantly, even in combination with photoactivation,
DACT probes
were not cytotoxic to the tested HeLa cells or the much more sensitive
primary murine splenocytes. Moreover, DACT-1 labeling
did not compromise cellular function, as evidenced by homing experiments
in which DACT-1-labeled splenocytes migrated as avidly
as eFluor670-labeled cells from blood into LNs of mice. Cellular coculture
studies further confirmed that DACT-1 was not transferred
between cells, in contrast to the commercial dye eFluor670, which
displayed considerable leakage from dye-labeled splenocytes to unlabeled
imLECs. These data illustrate the specificity problem inherent to
some fluorescent dyes available on the market[18] and confirm that DACT-1 labeling is not jeopardized
by costaining with other dyes. Moreover, proliferation assays revealed
that DACT-1 was retained in primary cells for up to 72
h. We therefore suggest that DACT-1 can be used as a
reliable photoactivatable cell tracker because it displays high retention
within the intracellular space, minimal intercellular transfer, and
long durability of the signal.Finally, by tracking the migration
of single splenocytes on imLEC
monolayers, we could demonstrate that it is possible to specifically
irradiate single cells in a complex 3D environment and to track such
a cell for long time periods (>20 h). This type of experiment requires
a robust photoactivatable dye that does not leak out of the cell of
interest and would have been impossible using currently available
dyes. This technique could therefore be useful for fate-mapping and
tracking of cells of interest in in vitro experiments[40] On the other hand, DACT-1-based
labeling could also be combined with ex vivo or in vivo time-lapse in tissues of either wild-type or genetically
modified mice using intravital microscopy.[41] In this case, iFRAP photoactivation could be implemented to select
a ROI or single cells for studying cellular migration or for labeling
cells for subsequent ex vivo isolation, in analogy
to experiments that have thus far been performed with transgenic mice
expressing photoconvertible proteins.[42,43] For such experiments,
the use of DACT dyes could represent a versatile and cost-effective
alternative.
Methods
Chemical Synthesis
and Compound Characterization
1H and 13C nuclear magnetic resonance (NMR) spectra
were recorded on Varian Gemini 300, Varian Mercury 300, Bruker ARX
300, Bruker DRX 400, Bruker AV 400, and Bruker AV-NEO 500 spectrometers
at 300, 400, or 500 MHz (1H) and 75 MHz, 100 MHz, or 125
MHz (13C), respectively. Chemical shifts (δ) are
reported in parts per million downfield from tetramethylsilane using
the residual deuterated solvent signals as an internal reference.
For 1H NMR, coupling constants J are given
in hertz, and the resonance multiplicity is described as s (singlet),
d (doublet), t (triplet), q (quartet), m (multiplet), and br (broad).
All spectra were recorded at 25 °C. Mass spectrometry (MS) and
high-resolution mass spectrometry (HR-MS) were performed by the MS-service
of the Laboratory for Organic Chemistry at the ETH Zürich on
a Waters Micromass AutoSpec-Ultima spectrometer (EI), on a Bruker
maXis spectrometer (ESI), or on a Varian IonSpec FT-ICR spectrometer
(MALDI). For MALDI measurements, the matrix was 2-[(2E)-3-(4-tert-butylphenyl)-2-methylprop-2-enylidene]malononitrile
(DCTB) or 3-hydroxypyridine-2-carboxylic acid (3-HPA). Masses are
reported in m/z units for the molecular
ion M for the exact
(ChemDraw) and the detected mass. NMR spectra can be obtained upon
request.
Reactions
All reactions that were conducted under exclusion
of air and water were performed in oven-dried glassware and under
a N2 atmosphere. Flash column chromatography (FC) was carried
out using silica gel (particle size: 40–63 μm, 230–400
mesh ASTM; Silicycle) employing a Büchi Reveleris PREP purification
system with HPLC-grade solvents. Analytical thin layer chromatography
(TLC) was performed on aluminum sheets or glass plates coated with
silica gel 60 F254 (Merck); visualization with a UV lamp
(254 and 366 nm). Evaporation under reduced pressure was performed
at 45–60 °C and 900–10 mbar with the use of a rotary
evaporator (Heidolph).
Cell Lines
HeLa cells (ATCC CCL2)
were grown in Dulbecco’s
Modified Eagle Medium (DMEM) supplemented with fetal bovine serum
(FBS, 10%) and penicillin-streptomycin (0.1%), referred to as growth
medium, at 37 °C in a 95% humidity atmosphere under a 5% CO2 environment. For imaging, HeLa cells were grown to 90% confluence
and seeded onto an eight-well Nunc Lab-Tek II chambered cover glass
plates (50 000 cells per well) for confocal microscopy or onto
Ibidi μ-slide eight-well plates (50 000 cells per well)
a day prior to imaging experiments. To generate imLECs, conditionally
immortalized lymphatic endothelial cells were isolated from Immorto
mice[44] and kept in liquid nitrogen. To
expand the cells, imLECs were seeded on collagen and fibronectin coated
dishes (both 10 μg mL–1) and cultured at 33
°C in a medium containing 40% DMEM (low glucose), 40% F12-Ham,
20% FCS, 56 μg mL–1 heparin, 10 μg mL–1 endothelial cell mitogen, antibiotic antimycotic
solution, and l-glutamine. Additionally, murine interferon-γ
(IFNγ; 1U mL–1) was added to induce large
T-antigen expression. Forty-eight hours before functional assays,
imLECs were cultured without IFNγ at 37 °C in the same
medium. For functional assays, the cells were cultured for 48 h at
37 °C without IFNγ prior the experiments,[44] and the monolayer formation was confirmed under the microscope.
Animals
C57BL/6 mice and OT-II mice[34] were bred under specific pathogen free (SPF) conditions
in the ETH Rodent Center HCI facility. In vivo homing
studies and splenocyte and bone marrow isolation were performed in
accordance with protocols approved by the Cantonal Veterinary Office
Zurich.
Authors: Alicia L Carlson; Joji Fujisaki; Juwell Wu; Judith M Runnels; Raphaël Turcotte; Joel A Spencer; Cristina Lo Celso; David T Scadden; Terry B Strom; Charles P Lin Journal: PLoS One Date: 2013-08-26 Impact factor: 3.240
Authors: Jonathan B Grimm; Anand K Muthusamy; Yajie Liang; Timothy A Brown; William C Lemon; Ronak Patel; Rongwen Lu; John J Macklin; Philipp J Keller; Na Ji; Luke D Lavis Journal: Nat Methods Date: 2017-09-04 Impact factor: 28.547