Literature DB >> 32289291

An integrated transcriptomics and network pharmacology approach to exploring the mechanism of adriamycin-induced kidney injury.

Shengsheng He1, Aiping Li2, Wangning Zhang3, Lichao Zhang4, Yuetao Liu3, Ke Li3, Xuemei Qin5.   

Abstract

BACKGROUND AND AIMS: Adriamycin nephropathy model (AN), a rodent model of nephrotic syndrome disease that was caused by the nephrotoxicity of adriamycin, has been widely used for pharmacodynamic evaluation of traditional Chinese medicine (TCM) in the treatment of kidney injury. Although some studies have clearly shown the pathological process of AN, the mechanism of kidney injury have not been systematically investigated.
METHODS: The reliability of AN was evaluated by weight, urinary protein quantitation, serum biochemical and histopathological examination. Transcriptomic sequencing combined with network pharmacology were used to elucidate the molecular mechanism of AN, and cell experiment combined with real-time quantitative PCR (RT-qPCR) and was used to validate the accuracy of transcriptomic sequencing result and KEGG pathways.
RESULTS: Network analysis result showed that Mapk10 and Ptgs2 played important roles in the development of adriamycin-induced kidney injury. KEGG pathway analysis showed that the mechanism of kidney injury may be related to the regulation of biosynthesis of unsaturated fatty acids, complement and coagulation cascades, PPAR signaling pathway and PI3K-AKT signaling pathway.
CONCLUSION: These results provide a new insight into the deep research on the mechanism of kidney injury, and provide an experimental basis for finding drug targets for the treatment of AN.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Adriamycin nephropathy model; Mechanism; Network pharmacology; RT-qPCR; Transcriptomics

Year:  2020        PMID: 32289291     DOI: 10.1016/j.cbi.2020.109096

Source DB:  PubMed          Journal:  Chem Biol Interact        ISSN: 0009-2797            Impact factor:   5.192


  2 in total

1.  Network Pharmacology and In Vivo Experimental Validation to Uncover the Renoprotective Mechanisms of Fangji Huangqi Decoction on Nephrotic Syndrome.

Authors:  Jiazhen Yin; Dongrong Yu; Lichan Mao; Caifeng Zhu; Jin Yu
Journal:  Evid Based Complement Alternat Med       Date:  2022-06-08       Impact factor: 2.650

2.  Comprehensive Analysis of the Effect of 20(R)-Ginsenoside Rg3 on Stroke Recovery in Rats via the Integrative miRNA-mRNA Regulatory Network.

Authors:  Rui Zhang; De-Yun Chen; Xing-Wei Luo; Yuan Yang; Xiao-Chao Zhang; Ren-Hua Yang; Peng Chen; Zhi-Qiang Shen; Bo He
Journal:  Molecules       Date:  2022-02-27       Impact factor: 4.411

  2 in total

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