| Literature DB >> 32287618 |
James H Spencer1, Melissa L Finucane2, Jefferson M Fox3, Sumeet Saksena3, Nargis Sultana4.
Abstract
Recent concerns with pandemic outbreaks of human disease and their origins in animal populations have ignited concerns regarding connections between Emerging Infectious Diseases (EID) and development. As disasters, health, and infectious disease become part of planning concern (Matthew & McDonald, 2007), greater focus on household infrastructure and EID disease outbreaks among poultry is warranted. Following Spencer (2013), this study examines the relationship between the mix of household-scale water supplies, sanitation systems, and construction materials, and Highly Pathogenic Avian Influenza (HPAI) among poultry in a developing country: Vietnam. Findings of our multivariate logistic regressions suggest that a non-linear, Kuznets-shaped urban transition (Spencer, 2013) has an independent effect on the outbreak of HPAI, especially as it relates to household-level sanitation infrastructure. We conclude that the Kuznets-shape development of household infrastructure characteristics in Vietnam play a significant role in explaining where poultry outbreaks occur. Using secondary data from the Census of Population and Housing, and the Agricultural Census at the District and Commune levels for the country of Vietnam, we performed logistic regression to test the relationship between outbreaks of HPAI in poultry and newly-developed "coherence indices" (Spencer, 2013) of household water supply, sanitation, and construction materials that measure nonlinear, transitional development. Results show that district-scale coherence indices are negatively and independently correlated with HPAI outbreaks, especially for sanitation. Findings also suggest that community-scale coherence of urban infrastructures is a powerful tool for predicting where HPAI poultry outbreaks are likely to occur, thereby providing health planners new tools for efficient surveillance.Entities:
Keywords: Avian influenza; Coherence index; Emerging infectious disease; Household infrastructure; The built landscape; Urban transition; Viet Nam
Year: 2019 PMID: 32287618 PMCID: PMC7125512 DOI: 10.1016/j.landurbplan.2019.103681
Source DB: PubMed Journal: Landsc Urban Plan ISSN: 0169-2046 Impact factor: 6.142
Fig. 1Environmental Risk Transition Framework (reproduced from Finucane, Fox, et al., 2014).
District-Level Descriptive Statistics of DV’s and IV’s.
| N | Mean | Median | Std. Deviation | |
|---|---|---|---|---|
| Water Supply Coherence Index | 662 | 0.4431 | 0.3987 | 0.28614 |
| Sanitation Coherence Index | 662 | 0.3429 | 0.2881 | 0.25000 |
| Construction Materials Coherence Index | 662 | 0.3090 | 0.3040 | 0.20146 |
| Poultry density | 662 | 5.2504 | 2.3027 | 6.75453 |
| Modernization Index | 662 | 0.2353 | 0.1978 | 0.19674 |
| % Completed Secondary School | 662 | 0.1306 | 0.1060 | 0.09232 |
| % Completed College | 662 | 0.0087 | 0.0080 | 0.00475 |
| % Collective Sector Employment | 662 | 0.2249 | 0.0076 | 0.32755 |
| *Presence of HPAI Outbreak (2004–2005) | 662 | # of Districts with outbreaks 447 | ||
Commune-Level Descriptive Statistics of DV’s and IV’s.
| N | Mean | Median | Std. Deviation | |
|---|---|---|---|---|
| Water Supply Coherence Index | 10,301 | 0.4888 | 0.4020 | 0.27703 |
| Sanitation Coherence Index | 10,301 | 0.3804 | 0.338 | 0.25969 |
| Construction Materials Coherence Index | 10,301 | 0.3648 | 0.3685 | 0.20183 |
| Poultry density | 10,810 | 7.0698 | 3.2658 | 9.68501 |
| Modernization Index | 10,301 | 0.2353 | 0.1978 | 0.19674 |
| % Completed Secondary School | 10,373 | 0.1216 | 0.0897 | 0.10358 |
| % Completed College | 10,373 | 0.0084 | 0.0067 | 0.00708 |
| % Collective Sector Employment | 10,373 | 0.2865 | 0.0057 | 0.39172 |
| *Presence of HPAI Outbreak (2004–2005) | 10,810 | # of Communes with outbreaks 2741 | ||
Fig. 2District Coherence Index for Housing Construction Materials, 2006
Fig. 3District Coherence Index for Water Supply, 2006
Fig. 4District Coherence Index for Sanitation Technology, 2006
Odds Ratios of HPAI District Outbreaks, 2004–05 (95% confidence intervals in parentheses).
| Viet Nam Household Water Supply Coherence Index | Viet Nam Household Sanitation Coherence Index | Viet Nam Household Construction Materials Coherence Index | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Coherence Index | 1.224 | 0.405 | 0.317 | 0.410 | 0.348 | 0.294 | 0.840 | 0.293 | 0.505 |
| Poultry density | 1.274 | 1.227 | 1.275 | 1.243 | 1.198 | 1.261 | 1.266 | 1.244 | 1.284 |
| Modernization Index | 20.379 | 34.665 | 13.783 | 15.512 | 18.359 | 18.641 | |||
| % Completed Secondary School | 2.773 | 7.769 | 4.450 | ||||||
| % Completed College | 0.000 | 0.000 | 0.000 | ||||||
| % Collective Sector Employment | 0.656 | 0.501 | 0.650 | ||||||
| R2 (Cox & Snell) | 0.166 | 0.184 | 0.204 | 0.158 | 0.183 | 0.207 | 0.154 | 0.189 | 0.202 |
| R2 (Nagelkerke) | 0.232 | 0.258 | 0.286 | 0.226 | 0.261 | 0.295 | 0.218 | 0.268 | 0.287 |
Odds Ratios of HPAI Commune Outbreaks, 2004–05 (95% confidence intervals in parentheses).
| Viet Nam Household Water Supply Coherence Index | Viet Nam Household Sanitation Coherence Index | Viet Nam Household Construction Materials Coherence Index | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Coherence Index | 0.981 | 0.369 | 0.318 | 0.631 | 0.412 | 0.449 | 0.615 | 0.283 | 0.408 |
| Poultry density | 1.030 | 1.017 | 1.030 | 1.026 | 1.016 | 1.027 | 1.034 | 1.030 | 1.036 |
| Modernization Index | 18.558 | 37.996 | 8.333 | 12.456 | 8.676 | 12.091 | |||
| % Completed Secondary School | 0.038 | 0.063 | 0.057 | ||||||
| % Completed College | 444.287 | 76.966 | 7226.016 | ||||||
| % Collective Sector Employment | 0.510 | 0.565 | 0.680 | ||||||
| R2 (Cox & Snell) | 0.015 | 0.043 | 0.059 | 0.015 | 0.041 | 0.054 | 0.018 | 0.046 | 0.055 |
| R2 (Nagelkerke) | 0.022 | 0.064 | 0.087 | 0.022 | 0.059 | 0.078 | 0.026 | 0.067 | 0.079 |
Construction Materials Odds Ratios of HPAI District Outbreak 2004–05, by Region and Province Dummy.
| Includes Provincial Dummy Variable | Provincial Dummy + Z-Scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Red River Delta | North East | North West | North Central Coast | South Central Coast | Central Highland | South East South | Mekong Delta | Viet Nam | Viet Nam (Z-scores) | |
| Building Materials Coherence 2006 | 754.666 | 0.211 | 0.003 | 0.833 | 0.000 | 0.053 | 2.423 | . | 0.313 | 0.002 |
| PoultryDensity, 2006 | 1.317 | 1.122 | 0.546 | 1.219 | 3.588 | 1.215 | 0.723 | 1.442E37 | 1.245 | 3.061 |
| Modernization Index 2006 | 0.007 | 25.913 | 1.657E11 | 0.898 | 114.894 | 0.000 | 0.785 | 0.000 | 3.692 | 578.685 |
| Percent Completed Secondary School (15+)1999 | 5.673E9 | 64.536 | 1.017E37 | 5.657E9 | 1.446E20 | 3.009E9 | 0.000 | . | 5121.214 | 4.445E26 |
| Percent Completed College 1999 (15+) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 2.227E104 | 1.436E67 | . | 0.000 | 0.000 |
| Percent Collective Sector Employment (15+) | 6.413 | 2.421 | 44.302 | 6.265 | 21.384 | 718.168 | 0.000 | 0.000 | 6.314 | 396555.665 |
| Constant | 6438707.793 | 95.034a | 2.570 | 0.657 | 0.000 | 0.062 | 8.378E9 | 1.164E9 | 4.393E8 | |
| −2 Log likelihood | 26.577a | 0.366 | 30.741a | 75.925a | 23.260a | 49.621a | 46.316a | 422.980a | .000a | |
| R Square (Cox & Snell) | 0.210 | 0.366 | 0.405 | 0.344 | 0.638 | 0.433 | 0.427 | 0.705 | ||
| R Square (Nagelkerke) | 0.545 | 0.502 | 0.543 | 0.465 | 0.851 | 0.600 | 0.606 | 1.00 | ||
Sanitation Odds Ratios of HPAI District Outbreak 2004–05, by Region and Province Dummy.
| Includes Provincial Dummy Variable | Provincial Dummy + Z-Scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Red River Delta | North East | North West | North Central Coast | South Central Coast | Central Highland | South East South | Mekong Delta | Viet Nam | Viet Nam (Z-scores) | |
| Sanitation Coherence 2006 | 0.046 | 0.043 | 0.002 | 0.002 | 0.094 | 0.257 | 9.289 | 0.003 | 0.063 | 0.000 |
| PoultryDensity, 2006 | 1.199 | 1.098 | 0.368 | 1.193 | 2.143 | 1.144 | 0.672 | 2.016 | 1.217 | 2.732 |
| Modernization Index 2006 | 3.849 | 0.824 | 4392.022 | 1.610 | 3.002 | 0.000 | 23.733 | 1.581 | 4.200 | 4296.285 |
| Percent Completed Secondary School (15+)1999 | 40567.006 | 18512.174 | 1.085E37 | 4.136E8 | 2523938.196 | 8.017E9 | 0.000 | 0.000 | 17968.853 | 1.096E26 |
| Percent Completed College 1999 (15+) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 4.960E53 | 4.536E19 | 1.304E202 | 0.000 | 0.000 |
| Percent Collective Sector Employment (15+) | 3.631 | 1.826 | 14.846 | 3.802 | 4.240 | 280.087 | 0.073 | 0.000 | 3.589 | 3718.510 |
| Constant | 1.795E9 | 2.699 | 271.838 | 0.916 | 0.000 | 0.117 | 8.606E8 | 1.645E9 | 3.725E9 | |
| −2 Log likelihood | 406.409a | 91.020a | 28.662a | 68.495a | 28.135a | 50.022a | 38.961a | 18.722a | 388.526a | .000a |
| R Square (Cox & Snell) | 0.442 | 0.379 | 0.369 | 0.391 | 0.594 | 0.468 | 0.215 | 0.439 | 0.701 | |
| R Square (Nagelkerke) | 0.627 | 0.522 | 0.492 | 0.530 | 0.792 | 0.656 | 0.653 | 0.626 | 1.00 | |
Water Supply Odds Ratios of HPAI District Outbreak 2004–05, by Region and Province Dummy.
| Includes Provincial Dummy Variable | Provincial Dummy + Z-Scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Red River Delta | North East | North West | North Central Coast | South Central Coast | Central Highland | South East South | Mekong Delta | Viet Nam | Viet Nam (Z-scores) | |
| Water Coherence 2006 | 0.727 | 0.066 | 0.112 | 0.028 | 23386.159 | 0.061 | 0.001 | 0.315 | 0.000 | |
| PoultryDensity, 2006 | 1.277 | 1.107 | 0.630 | 1.121 | 1.856 | 1.250 | 0.769 | 1.238 | 3.157 | |
| Modernization Index 2006 | 0.033 | 110.075 | 283168.440 | 961.998 | 0.000 | 0.000 | 377682.802 | 9.704 | 804458.318 | |
| Percent Completed Secondary School (15+)1999 | 2.194E8 | 36.546 | 6.796E33 | 1.537E10 | 75917.065 | 6.576E8 | 0.013 | 5477.313 | 1.469E27 | |
| Percent Completed College 1999 (15+) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 8.347E83 | 0.000 | 0.000 | 0.000 | |
| Percent Collective Sector Employment (15+) | 5.614 | 1.996 | 13.410 | 9.139 | 9.823 | 721.941 | 1.342E44 | 7.431 | 1362672.977 | |
| Constant | 1.768E8 | 0.971 | 1.159 | 0.333 | 0.000 | 0.111 | 1.456E9 | 3.939E9 | ||
| −2 Log likelihood | 26.132a | 92.450a | 33.612a | 68.307a | 29.379a | 49.703a | 28.560a | 387.238a | .000a | |
| R Square (Cox & Snell) | 0.228 | 0.378 | 0.356 | 0.380 | 0.583 | 0.522 | 0.442 | 0.714 | ||
| R Square (Nagelkerke) | 0.534 | 0.518 | 0.477 | 0.512 | 0.779 | 0.718 | 0.619 | 1.00 | ||
Construction Materials Odds Ratios of HPAI Commune Outbreak 2004–05, by Region and Province Dummy.
| Includes Provincial Dummy Variable | Provincial Dummy + Z-Scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Red River Delta | North East | North West | North Central Coast | South Central Coast | Central Highland | South East South | Mekong Delta | Viet Nam | Viet Nam (Z-scores) | |
| Building Materials Coherence 2006 | 3.939 | 0.626 | 0.701 | 1.050 | 0.262 | 0.940 | 1.173 | 0.461 | 0.872 | 0.310 |
| Poultry Density, 2006 | 1.019 | 1.009 | 1.122 | 1.008 | 1.098 | 1.026 | 1.045 | 1.025 | 1.021 | 1.167 |
| Modernization Index 2006 | 1.359 | 1.980 | 696.241 | 3.578 | 8.757 | 2.704 | 0.361 | 0.376 | 2.507 | 631.862 |
| Percent Completed Secondary School (15+)1999 | 0.268 | 10.021 | 2.715 | 263.131 | 0.132 | 6.148 | 4.646 | 2.524 | 8.949 | 335809.923 |
| Percent Completed College 1999 (15+) | 0.001 | 0.281 | 0.001 | 0.000 | 5.044E11 | 9.471E47 | 3.944E7 | 164.666 | 0.007 | 0.000 |
| Percent Collective Sector Employment (15+) | 0.934 | 1.295 | 3.181 | 2.984 | 2.175 | 7.796 | 24.956 | 1.959 | 1.889 | 68.100 |
| Constant | 0.235 | 0.185 | 0.006 | 0.087 | 0.000 | 0.010 | 0.329 | 1.759 | 0.701 | 0.116 |
| −2 Log likelihood | 2364.179a | 1631.836a | 298.118a | 1165.506a | 571.304a | 367.750a | 503.543a | 1329.838a | 8364.298a | .000a |
| R Square (Cox & Snell) | 0.107 | 0.114 | 0.126 | 0.088 | 0.239 | 0.192 | 0.252 | 0.258 | 0.687 | |
| R Square (Nagelkerke) | 0.148 | 0.188 | 0.262 | 0.165 | 0.373 | 0.309 | 0.350 | 0.376 | 1.00 | |
Sanitation Odds Ratios of HPAI Commune Outbreak 2004–05, by Region and Province Dummy.
| Includes Provincial Dummy Variable | Provincial Dummy + Z-Scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Red River Delta | North East | North West | North Central Coast | South Central Coast | Central Highland | South East South | Mekong Delta | Viet Nam | Viet Nam (Z-scores) | |
| Sanitation Coherence 2006 | 1.955 | 0.436 | 0.189 | 0.653 | 0.861 | 0.241 | 1.043 | 1.089 | 0.701 | 0.165 |
| Poultry Density, 2006 | 1.017 | 1.008 | 1.054 | 1.004 | 1.092 | 1.018 | 1.044 | 1.029 | 1.018 | 1.139 |
| Modernization Index 2006 | 1.563 | 1.503 | 384.296 | 4.565 | 6.882 | 27.482 | 0.483 | 0.437 | 2.966 | 1373.603 |
| Percent Completed Secondary School (15+)1999 | 0.254 | 8.896 | 3.052 | 312.335 | 0.051 | 3.072 | 0.778 | 2.127 | 10.440 | 901998.770 |
| Percent Completed College 1999 (15+) | 0.003 | 2.266 | 0.035 | 0.000 | 1.586E14 | 4.655E59 | 1.125E19 | 600311.190 | 0.003 | 0.000 |
| Percent Collective Sector Employment (15+) | 0.953 | 1.166 | 3.062 | 2.782 | 1.986 | 6.765 | 32.320 | 2.147 | 1.671 | 37.177 |
| Constant | 0.389 | 0.230 | 0.011 | 0.093 | 0.000 | 0.010 | 0.282 | 1.285 | 0.694 | 0.099 |
| −2 Log likelihood | 2291.429a | 1548.936a | 259.813a | 1155.902a | 543.477a | 319.301a | 458.175a | 1322.533a | 8033.934a | .000a |
| R Square (Cox & Snell) | 0.109 | 0.119 | 0.146 | 0.090 | 0.230 | 0.184 | 0.253 | 0.260 | 0.693 | |
| R Square (Nagelkerke) | 0.151 | 0.194 | 0.289 | 0.16775 | 0.353 | 0.296 | 0.351 | 0.376 | 1.00 | |
Water Supply Odds Ratios of HPAI Commune Outbreak 2004–05, by Region and Province Dummy.
| Includes Provincial Dummy Variable | Provincial Dummy + Z-Scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Red River Delta | North East | North West | North Central Coast | South Central Coast | Central Highland | South East South | Mekong Delta | VietNam | Viet Nam (Z-scores) | |
| Water Coherence 2006 | 0.450 | 1.707 | 0.415 | 0.438 | 0.715 | 0.903 | 0.909 | 1.334 | 0.743 | 0.136 |
| Poultry Density, 2006 | 1.023 | 1.006 | 1.090 | 1.013 | 1.081 | 0.989 | 1.008 | 1.018 | 1.019 | 1.144 |
| Modernization Index 2006 | 2.760 | 1.203 | 6578.951 | 8.282 | 18.137 | 8.825 | 0.601 | 0.664 | 3.653 | 4849.112 |
| Percent Completed Secondary School (15+) 1999 | 1.650 | 10.690 | 1.331 | 19.857 | 0.035 | 15.972 | 0.052 | 1.158 | 9.427 | 854357.508 |
| Percent Completed College 1999 (15+) | 0.000 | 111.026 | 5170.766 | 0.004 | 6.705E11 | 3.980E44 | 9.770E30 | 302.205 | 0.625 | 0.002 |
| Percent Collective Sector Employment (15+) | 0.888 | 1.290 | 3.039 | 2.811 | 2.325 | 8.548 | 39.355 | 2.285 | 1.808 | 45.452 |
| Constant | 0.427 | 0.123 | 0.004 | 0.118 | 0.000 | 0.010 | 0.296 | 1.156 | 0.929 | 1.678 |
| −2 Log likelihood | 1777.354a | 1582.676a | 286.368a | 1030.213a | 484.953a | 359.102a | 322.298a | 1090.983a | 7042.713a | .000a |
| R Square (Cox & Snell) | 0.131 | 0.113 | 0.129 | 0.084 | 0.211 | 0.240 | 0.259 | 0.265 | 0.680 | |
| R Square (Nagelkerke) | 0.183 | 0.186 | 0.269 | 0.161 | 0.345 | 0.384 | 0.361 | 0.390 | 1.00 | |