Literature DB >> 32274846

Advances in Activity-Based Sensing Probes for Isoform-Selective Imaging of Enzymatic Activity.

Sarah H Gardner1, Christopher J Reinhardt2, Jefferson Chan2,1.   

Abstract

Until recently, there were no generalizable methods for assessing the effects of post-translational regulation on enzymatic activity. Activity-based sensing (ABS) has emerged as a powerful approach for monitoring small-molecule and enzyme activities within living systems. Initial examples of ABS were applied for measuring general enzymatic activity; however, a recent focus has been placed on increasing the selectivity to monitor a single enzyme or isoform. The highest degree of selectivity is required for differentiating between isoforms, where the targets display significant structural similarities as a result of a gene duplication or alternative splicing. This Minireview highlights key examples of small-molecule isoform-selective probes with a focus on the relevance of isoform differentiation, design strategies to achieve selectivity, and applications in basic biology or in the clinic.
© 2020 Wiley-VCH GmbH.

Entities:  

Keywords:  activity-based sensing; fluorescence; molecular imaging; probe development; rational design

Mesh:

Substances:

Year:  2020        PMID: 32274846      PMCID: PMC7544620          DOI: 10.1002/anie.202003687

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  88 in total

1.  Measurement of activity of single molecules of beta-D-galactosidase.

Authors:  B ROTMAN
Journal:  Proc Natl Acad Sci U S A       Date:  1961-12-15       Impact factor: 11.205

2.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  Radiosynthesis, in vitro validation, and in vivo evaluation of 18F-labeled COX-1 and COX-2 inhibitors.

Authors:  Timothy J McCarthy; Ahmed U Sheriff; Matthew J Graneto; John J Talley; Michael J Welch
Journal:  J Nucl Med       Date:  2002-01       Impact factor: 10.057

Review 4.  Activity-based protein profiling: from enzyme chemistry to proteomic chemistry.

Authors:  Benjamin F Cravatt; Aaron T Wright; John W Kozarich
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

Review 5.  Cytochrome P450 and arachidonic acid bioactivation. Molecular and functional properties of the arachidonate monooxygenase.

Authors:  J H Capdevila; J R Falck; R C Harris
Journal:  J Lipid Res       Date:  2000-02       Impact factor: 5.922

Review 6.  Activity-based sensing fluorescent probes for iron in biological systems.

Authors:  Allegra T Aron; Audrey G Reeves; Christopher J Chang
Journal:  Curr Opin Chem Biol       Date:  2018-01-05       Impact factor: 8.822

7.  Molecular Design Strategy to Construct the Near-Infrared Fluorescent Probe for Selectively Sensing Human Cytochrome P450 2J2.

Authors:  Jing Ning; Tao Liu; Peipei Dong; Wei Wang; Guangbo Ge; Bo Wang; Zhenlong Yu; Lei Shi; Xiangge Tian; Xiaokui Huo; Lei Feng; Chao Wang; Chengpeng Sun; Jingnan Cui; Tony D James; Xiaochi Ma
Journal:  J Am Chem Soc       Date:  2019-01-02       Impact factor: 15.419

8.  Effect of regulated expression of human cyclooxygenase isoforms on eicosanoid and isoeicosanoid production in inflammation.

Authors:  B F McAdam; I A Mardini; A Habib; A Burke; J A Lawson; S Kapoor; G A FitzGerald
Journal:  J Clin Invest       Date:  2000-05       Impact factor: 14.808

Review 9.  The role of cytochrome P450 enzymes in endogenous signalling pathways and environmental carcinogenesis.

Authors:  Daniel W Nebert; Timothy P Dalton
Journal:  Nat Rev Cancer       Date:  2006-12       Impact factor: 60.716

10.  A sensitive two-photon probe to selectively detect monoamine oxidase B activity in Parkinson's disease models.

Authors:  Lin Li; Cheng-Wu Zhang; Grace Y J Chen; Biwei Zhu; Chou Chai; Qing-Hua Xu; Eng-King Tan; Qing Zhu; Kah-Leong Lim; Shao Q Yao
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

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  6 in total

1.  Activity-based photoacoustic probe for biopsy-free assessment of copper in murine models of Wilson's disease and liver metastasis.

Authors:  Melissa Y Lucero; Yuqi Tang; Chloe J Zhang; Shengzhang Su; Joseph A Forzano; Valeria Garcia; Xin Huang; David Moreno; Jefferson Chan
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-07       Impact factor: 11.205

Review 2.  Targeted contrast agents and activatable probes for photoacoustic imaging of cancer.

Authors:  Zhenxiang Zhao; Chelsea B Swartchick; Jefferson Chan
Journal:  Chem Soc Rev       Date:  2022-02-07       Impact factor: 60.615

Review 3.  Lessons in Organic Fluorescent Probe Discovery.

Authors:  Sachin B Wagh; Vladimir A Maslivetc; James J La Clair; Alexander Kornienko
Journal:  Chembiochem       Date:  2021-06-23       Impact factor: 3.164

Review 4.  Activated molecular probes for enzyme recognition and detection.

Authors:  Meng Yuan; Ying Wu; Caiyan Zhao; Zhongxiang Chen; Lichao Su; Huanghao Yang; Jibin Song
Journal:  Theranostics       Date:  2022-01-01       Impact factor: 11.556

5.  Activity-Based NIR Bioluminescence Probe Enables Discovery of Diet-Induced Modulation of the Tumor Microenvironment via Nitric Oxide.

Authors:  Anuj K Yadav; Michael C Lee; Melissa Y Lucero; Shengzhang Su; Christopher J Reinhardt; Jefferson Chan
Journal:  ACS Cent Sci       Date:  2022-03-16       Impact factor: 18.728

Review 6.  Human carboxylesterases and fluorescent probes to image their activity in live cells.

Authors:  Anchal Singh; Mingze Gao; Michael W Beck
Journal:  RSC Med Chem       Date:  2021-05-18
  6 in total

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