Literature DB >> 32273360

Whole-Genome Draft Assemblies of Difficult-to-Classify Escherichia coli O157 and Non-O157 Isolates from Feces of Canadian Feedlot Cattle.

Vinicius Silva Castro1, Eduardo Eustáquio de Souza Figueiredo2, Tim McAllister3, Robin King4, Tim Reuter5, Rodrigo Ortega Polo3, Carlos Adam Conte1, Kim Stanford6.   

Abstract

Forty-eight Escherichia coli strains were chosen due to variable detection of stx or serogroup by PCR. Although all strains were initially determined to be Shiga toxin-producing Escherichia coli (STEC), their genomes revealed 11 isolates carrying stx 1a, stx 1b, stx 2a, and/or stx 2b Assembled genome sizes varied between 4,667,418 and 5,556,121 bp, with N 50 values between 79,648 and 294,166 bp and G+C contents between 50.3% and 51.4%.
Copyright © 2020 Castro et al.

Entities:  

Year:  2020        PMID: 32273360     DOI: 10.1128/MRA.00168-20

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN: 2576-098X


  1 in total

1.  Whole-Genome Sequencing Analyses of Heat-Resistant Escherichia coli Isolated from Brazilian Beef.

Authors:  Maxsueli Aparecida Moura Machado; Vinicius Silva Castro; Ricardo César Tavares Carvalho; Eduardo Eustáquio de Souza Figueiredo; Carlos Adam Conte-Junior
Journal:  Microbiol Resour Announc       Date:  2022-07-21
  1 in total

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