Literature DB >> 32273179

Complete genome sequence of Bacillus sp. N1-1, a κ-selenocarrageenan degrading bacterium isolated from the cold seep in the South China Sea.

Kai Wang1, Yang Zhao1, Xixi Wang2, Changfeng Qu3, Jinlai Miao4.   

Abstract

κ-Selenocarrageenan is made from natural κ-carrageenan, in which Se partially replaces Sulfur (S). The underlying mechanism of κ-selenocarrageenan degradation remain unreported so far. Here, we describe the complete genome of a cold seep bacterium, Bacillus sp. N1-1, which can degrade κ-selenocarrageenan. The strain has a circular genome of 4,497,340 bp and 40.48 mol% G + C content, consisting of 4272 protein-coding sequences (CDSs), 87 tRNAs, as well as 28 rRNA operons as 5S-16S-23S rRNA. N1-1 genome contains several protein-coding genes relating to polysaccharide degradation and the potential of this bacterium to produce enzymes for the hydrolysis of κ-selenocarrageenan on the basis of complete genome analysis could be discovered.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bacillus; Cold seep; Degradation; Genome sequence; Selenium polysaccharide

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Year:  2020        PMID: 32273179     DOI: 10.1016/j.margen.2020.100771

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  2 in total

1.  Comparative Genomics of Marine Bacteria from a Historically Defined Plastic Biodegradation Consortium with the Capacity to Biodegrade Polyhydroxyalkanoates.

Authors:  Fons A de Vogel; Cathleen Schlundt; Robert E Stote; Jo Ann Ratto; Linda A Amaral-Zettler
Journal:  Microorganisms       Date:  2021-01-16

2.  Complete genome sequencing of Bacillus sp. TK-2, analysis of its cold evolution adaptability.

Authors:  Lijun Shen; Xueli Zang; Ke Sun; Huan Chen; Xinying Che; Yang Sun; Gang Wang; Sitong Zhang; Guang Chen
Journal:  Sci Rep       Date:  2021-03-01       Impact factor: 4.379

  2 in total

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