Literature DB >> 32258570

Genetic polymorphism in DNMTs and gastric cancer: A systematic review and meta-analysis.

Marco Neves1,2, Joana Ribeiro1,2,3, Rui Medeiros1,2,3,4,5, Hugo Sousa1,2,5.   

Abstract

HIGHLIGHTS: Single nucleotide polymorphisms (SNPs) in DNA methyltransferases (DNMTs) modulate protein expression and affect DNA methylation.Aberrant DNA methylation, have been associated with gastric carcinogenesis.DNMT2 rs11254413 is associated with protection for GC development.DNMT3A rs7560488, DNMT3A rs36012910 and, specially, DNMT1 rs16999593 are associated with increased susceptibility for GC development. ABSTRACT: Epigenetics alterations, including aberrant DNA methylation, have been associated with gastric carcinogenesis. Single nucleotide polymorphisms (SNPs) in DNA methyltransferases (DNMTs) may influence protein expression and therefore affect DNA regulation and susceptibility for Gastric Cancer (GC).We have performed a systematic review and meta-analysis involving 11 studies and a total of 24 SNPs in DNMTs were analyzed. According to literature, only 4 SNPs, DNMT1 rs16999593, DNMT2 rs11254413 and DNMT3A rs7560488 and DNMT3A rs36012910, were associated with GC. DNMT1 rs16999593 and DNMT3A rs7560488C allele and DNMT3A rs36012910 G allele showed an increased risk for GC. On the other hand, DNMT2 rs11254413 G allele presented a protective effect for GC. Additionally, the meta-analysis evaluated the SNPs analyzed in more than one study (n = 6). Results revealed that only DNMT1 rs16999593 had a statistically significant association with GC development (OR = 1.31; 95% CI = 1.08-1.60; p = 0.006 for TC + CC genotypes).Our study suggests that DNMT2 rs11254413, DNMT3A rs7560488, DNMT3A rs36012910 and, specially, DNMT1 rs16999593 may have an association with GC development. Nevertheless, further studies are need using different populations to clarify this association with GC risk. Copyright 2016 PBJ-Associação Porto Biomedical/Porto Biomedical Society.

Entities:  

Keywords:  DNA methylation; DNA methyltransferase; Gastric cancer; Single nucleotide polymorphism

Year:  2016        PMID: 32258570      PMCID: PMC6806959          DOI: 10.1016/j.pbj.2016.10.005

Source DB:  PubMed          Journal:  Porto Biomed J        ISSN: 2444-8664


  30 in total

1.  Expression of mRNA for DNA methyltransferases and methyl-CpG-binding proteins and DNA methylation status on CpG islands and pericentromeric satellite regions during human hepatocarcinogenesis.

Authors:  Y Saito; Y Kanai; M Sakamoto; H Saito; H Ishii; S Hirohashi
Journal:  Hepatology       Date:  2001-03       Impact factor: 17.425

2.  Single nucleotide polymorphism in DNA methyltransferase 3B promoter and its association with gastric cardiac adenocarcinoma in North China.

Authors:  Yi-Min Wang; Rui Wang; Deng-Gui Wen; Yan Li; Wei Guo; Na Wang; Li-Zhen Wei; Yu-Tong He; Zhi-Feng Chen; Xiu-Feng Zhang; Jian-Hui Zhang
Journal:  World J Gastroenterol       Date:  2005-06-21       Impact factor: 5.742

3.  The TaqMan method for SNP genotyping.

Authors:  Gong-Qing Shen; Kalil G Abdullah; Qing Kenneth Wang
Journal:  Methods Mol Biol       Date:  2009

4.  Clinical significance of the expression of DNA methyltransferase proteins in gastric cancer.

Authors:  Jian Yang; Xiaowei Wei; Qingxiang Wu; Zhi Xu; Dongying Gu; Yan Jin; Yue Shen; Huaying Huang; Hong Fan; Jinfei Chen
Journal:  Mol Med Rep       Date:  2011-08-31       Impact factor: 2.952

5.  No evidence of correlation between the single nucleotide polymorphism of DNMT3B promoter and gastric cancer risk in a Japanese population.

Authors:  Phyu Phyu Aung; Shunji Matsumura; Kazuya Kuraoka; Kyoko Kunimitsu; Kazuhiro Yoshida; Keisuke Matsusaki; Hirofumi Nakayama; Wataru Yasui
Journal:  Oncol Rep       Date:  2005-11       Impact factor: 3.906

6.  Relationship between Epstein-Barr virus-encoded proteins with cell proliferation, apoptosis, and apoptosis-related proteins in gastric carcinoma.

Authors:  Yun Wang; Bing Luo; Li-Ping Yan; Bao-Hua Huang; Peng Zhao
Journal:  World J Gastroenterol       Date:  2005-06-07       Impact factor: 5.742

7.  Mutational analysis of DNMT3A gene in acute leukemias and common solid cancers.

Authors:  Min S Kim; Yoo R Kim; Nam J Yoo; Sug H Lee
Journal:  APMIS       Date:  2012-07-03       Impact factor: 3.205

8.  Hypomethylation distinguishes genes of some human cancers from their normal counterparts.

Authors:  A P Feinberg; B Vogelstein
Journal:  Nature       Date:  1983-01-06       Impact factor: 49.962

9.  Mutation of the DNA methyltransferase (DNMT) 1 gene in human colorectal cancers.

Authors:  Yae Kanai; Saori Ushijima; Yukihiro Nakanishi; Michiie Sakamoto; Setsuo Hirohashi
Journal:  Cancer Lett       Date:  2003-03-20       Impact factor: 8.679

10.  Risk-association of DNA methyltransferases polymorphisms with gastric cancer in the Southern Chinese population.

Authors:  Xue-Xi Yang; Xuan-Qiu He; Fen-Xia Li; Ying-Song Wu; Yang Gao; Ming Li
Journal:  Int J Mol Sci       Date:  2012-07-05       Impact factor: 6.208

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  1 in total

Review 1.  Epigenetic Mechanisms in Gastric Cancer: Potential New Therapeutic Opportunities.

Authors:  Matteo Canale; Andrea Casadei-Gardini; Paola Ulivi; Maria Arechederra; Carmen Berasain; Pier-Luigi Lollini; Maite G Fernández-Barrena; Matías A Avila
Journal:  Int J Mol Sci       Date:  2020-07-31       Impact factor: 5.923

  1 in total

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