Literature DB >> 32255934

Genome-wide analysis of NAC transcription factor family in maize under drought stress and rewatering.

Guorui Wang1, Zhen Yuan1, Pengyu Zhang1, Zhixue Liu1, Tongchao Wang1, Li Wei1.   

Abstract

The plant-specific NAC transcription factor (TFs) plays crucial role in plant growth as well as in stress resistance. In the present study, 87 Zea mays NAC TFs were obtained from the transcriptome analysis using drought-resistant maize inbred line Y882 as experimental material under PEG stress and rewatering treatment. Comprehensive analyses were conducted including genes structure, chromosomal localization, phylogenetic tree and motif prediction, cis-elements and expression patterns. The results showed that the 87 ZmNAC genes distributed on 10 chromosomes and were categorized into 15 groups based on their conserved gene structure and motifs. Phylogenetic tree analysis was also constructed referencing to the counterparts of Arabidopsis and rice, and the stress-related cis-elements in the promoter region were also analyzed. 87 ZmNAC genes exhibited different expression levels at 3 treatment points, indicating different response to drought stress. This genome-wide analysis of 87 ZmNAC genes will provide basis for further gene function detection. © Prof. H.S. Srivastava Foundation for Science and Society 2020.

Entities:  

Keywords:  Drought; Expression pattern; NAC transcription factors; Zea mays

Year:  2020        PMID: 32255934      PMCID: PMC7113357          DOI: 10.1007/s12298-020-00770-w

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  27 in total

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Journal:  J Exp Bot       Date:  2002-01       Impact factor: 6.992

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
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Review 3.  NAC proteins: regulation and role in stress tolerance.

Authors:  Swati Puranik; Pranav Pankaj Sahu; Prem S Srivastava; Manoj Prasad
Journal:  Trends Plant Sci       Date:  2012-03-21       Impact factor: 18.313

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Journal:  Plant Cell Rep       Date:  2015-02-10       Impact factor: 4.570

5.  Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter.

Authors:  Lam-Son Phan Tran; Kazuo Nakashima; Yoh Sakuma; Sean D Simpson; Yasunari Fujita; Kyonoshin Maruyama; Miki Fujita; Motoaki Seki; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Plant Cell       Date:  2004-08-19       Impact factor: 11.277

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Journal:  Sci China Life Sci       Date:  2016-01-23       Impact factor: 6.038

7.  Genomewide identification, classification and analysis of NAC type gene family in maize.

Authors:  Xiaojian Peng; Yang Zhao; Xiaoming Li; Min Wu; Wenbo Chai; Lei Sheng; Yu Wang; Qing Dong; Haiyang Jiang; Beijiu Cheng
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8.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

9.  A stress-responsive NAC transcription factor SNAC3 confers heat and drought tolerance through modulation of reactive oxygen species in rice.

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Journal:  J Exp Bot       Date:  2015-08-10       Impact factor: 6.992

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Journal:  BMC Plant Biol       Date:  2018-07-24       Impact factor: 4.215

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Authors:  Xiao Qiu; GuoRui Wang; Salah Fatouh Abou-Elwafa; Jiaxu Fu; Zhixue Liu; PengYu Zhang; Xiaowen Xie; Lixia Ku; Ying Ma; XiaoKang Guan; Li Wei
Journal:  Physiol Mol Biol Plants       Date:  2022-03-05

2.  A Rice R2R3-Type MYB Transcription Factor OsFLP Positively Regulates Drought Stress Response via OsNAC.

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4.  Identifying Signal-Crosstalk Mechanism in Maize Plants during Combined Salinity and Boron Stress Using Integrative Systems Biology Approaches.

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5.  Genome-wide identification and comprehensive analyses of NAC transcription factor gene family and expression analysis under Fusarium kyushuense and drought stress conditions in Passiflora edulis.

Authors:  Qiang Yang; Binqi Li; Hafiz Muhammad Rizwan; Kaiwei Sun; Jiajing Zeng; Meng Shi; Tianxin Guo; Faxing Chen
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6.  Transcriptomic and physiological responses of contrasting maize genotypes to drought stress.

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7.  Systematic analysis of differentially expressed ZmMYB genes related to drought stress in maize.

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