Literature DB >> 32253632

Bardet-Biedl syndrome in two unrelated patients with identical compound heterozygous SCLT1 mutations.

Naoya Morisada1,2, Riku Hamada3, Kenichiro Miura4, Ming Juan Ye5, Kandai Nozu5, Motoshi Hattori4, Kazumoto Iijima5.   

Abstract

Bardet-Biedl syndrome (BBS) is a rare autosomal recessive ciliopathy characterized by retinitis pigmentosa (RP), truncal obesity, cognitive impairment, hypogonadism in men, polydactyly, and renal abnormalities with severe renal dysfunction. Twenty-two causative genes have already been reported for this disorder. In this study, we identified two unrelated Japanese patients with clinical diagnoses of BBS associated with compound heterozygous SCLT1 mutation. Patient 1 was a 10-year-old girl, and patient 2 was a 22-year-old man. Both the patients showed severe renal dysfunction in childhood, RP, mild intellectual disability, short stature, and truncal obesity, without oral aberrations and polydactyly. Patient 2 also had hypogonadism. We identified two missense variants in SCLT1, c.[1218G > A] and [1631A > G], in both the patients by next-generation sequencing. Subsequent cDNA analysis revealed that c.1218G > A affected exon 14 skipping in SCLT1. To date, SCLT1 has been reported as the causative gene of oral-facial-digital syndrome type IX, and Senior-Løken syndrome. The phenotypes of both the present patients were compatible with BBS. These results highlight SCLT1 as an additional candidate for BBS phenotype in an autosomal recessive manner.

Entities:  

Keywords:  Bardet–biedl syndrome; Ciliopathy; Next-generation sequencing; SCLT1

Year:  2020        PMID: 32253632      PMCID: PMC7320120          DOI: 10.1007/s13730-020-00472-y

Source DB:  PubMed          Journal:  CEN Case Rep        ISSN: 2192-4449


  20 in total

1.  MutationTaster evaluates disease-causing potential of sequence alterations.

Authors:  Jana Marie Schwarz; Christian Rödelsperger; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2010-08       Impact factor: 28.547

2.  The oral-facial-digital syndrome type 1 (OFD1), a cause of polycystic kidney disease and associated malformations, maps to Xp22.2-Xp22.3.

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Review 3.  Ciliopathies.

Authors:  Daniela A Braun; Friedhelm Hildebrandt
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-03-01       Impact factor: 10.005

4.  Ciliary genes TBC1D32/C6orf170 and SCLT1 are mutated in patients with OFD type IX.

Authors:  Nouran Adly; Amal Alhashem; Amer Ammari; Fowzan S Alkuraya
Journal:  Hum Mutat       Date:  2013-11-25       Impact factor: 4.878

5.  A method and server for predicting damaging missense mutations.

Authors:  Ivan A Adzhubei; Steffen Schmidt; Leonid Peshkin; Vasily E Ramensky; Anna Gerasimova; Peer Bork; Alexey S Kondrashov; Shamil R Sunyaev
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

6.  Predicting the functional effect of amino acid substitutions and indels.

Authors:  Yongwook Choi; Gregory E Sims; Sean Murphy; Jason R Miller; Agnes P Chan
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

7.  Identifying a high fraction of the human genome to be under selective constraint using GERP++.

Authors:  Eugene V Davydov; David L Goode; Marina Sirota; Gregory M Cooper; Arend Sidow; Serafim Batzoglou
Journal:  PLoS Comput Biol       Date:  2010-12-02       Impact factor: 4.475

8.  Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Authors:  Sue Richards; Nazneen Aziz; Sherri Bale; David Bick; Soma Das; Julie Gastier-Foster; Wayne W Grody; Madhuri Hegde; Elaine Lyon; Elaine Spector; Karl Voelkerding; Heidi L Rehm
Journal:  Genet Med       Date:  2015-03-05       Impact factor: 8.822

9.  Compound heterozygous splice site variants in the SCLT1 gene highlight an additional candidate locus for Senior-Løken syndrome.

Authors:  Satoshi Katagiri; Takaaki Hayashi; Kazutoshi Yoshitake; Noriyuki Murai; Zenichi Matsui; Hiroyuki Kubo; Hiroyuki Satoh; Senya Matsufuji; Tsuyoshi Takamura; Takashi Yokoo; Yoshihiro Omori; Takahisa Furukawa; Takeshi Iwata; Tadashi Nakano
Journal:  Sci Rep       Date:  2018-11-13       Impact factor: 4.379

10.  CADD: predicting the deleteriousness of variants throughout the human genome.

Authors:  Philipp Rentzsch; Daniela Witten; Gregory M Cooper; Jay Shendure; Martin Kircher
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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  2 in total

1.  Bardet-Biedl Syndrome Caused by Skipping of SCLT1 Complicated by Microvesicular Steatohepatitis.

Authors:  Kentaro Horiuchi; Tomomi Kogiso; Takaomi Sagawa; Taito Ito; Makiko Taniai; Kenichiro Miura; Motoshi Hattori; Naoya Morisada; Etsuko Hashimoto; Katsutoshi Tokushige
Journal:  Intern Med       Date:  2020-11-01       Impact factor: 1.271

Review 2.  The Role of Centrosome Distal Appendage Proteins (DAPs) in Nephronophthisis and Ciliogenesis.

Authors:  Fatma Mansour; Felix J Boivin; Iman B Shaheed; Markus Schueler; Kai M Schmidt-Ott
Journal:  Int J Mol Sci       Date:  2021-11-12       Impact factor: 5.923

  2 in total

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