| Literature DB >> 32252830 |
Tong Zhou1, Yang Chen1,2, Bohao Zhao1, Shuaishuai Hu1, Jiali Li1, Ming Liu1, Shuang Liang1, Zhiyuan Bao1, Xinsheng Wu3,4.
Abstract
BACKGROUND: Seven in absentia homolog 1 (SIAH1) is an E3 ubiquitin ligase containing a RING-finger domain and a key regulator of normal development. Skin and hair follicle development is a complex and special process of morphogenesis involving multiple signaling pathways. SIAH1 is enriched in the Wnt signaling pathway and potentially related to hair follicle cycle and skin development. This study aims to provide evidence for the role of SIAH1 in skin and hair development.Entities:
Keywords: Angora rabbit; Expression analysis; Molecular cloning; SIAH1; Skin and hair follicle development
Mesh:
Substances:
Year: 2020 PMID: 32252830 PMCID: PMC7137485 DOI: 10.1186/s41065-020-00126-0
Source DB: PubMed Journal: Hereditas ISSN: 0018-0661 Impact factor: 3.271
Fig. 1Molecular characterization of SIAH1. a Nucleotide and deduced amino acid sequences of Angora rabbit SIAH1 gene. * indicates stop codon; blue letters indicate initiation codon; green letters indicate termination codon; the RING domain is in bold and the Sina domain underlined. b Multiple sequence alignment of deduced amino acids of SIAH1 between rabbit and other species. The black and gray highlights represent identical and similar, respectively. c The neighbor-joining phylogenetic tree was constructed based on the SIAH1 amino acid sequence of each species. The confidence of each node was evaluated repeatedly by 1000 bootstrap with Mega 7.0. The ruler (0.002) means genetic distance
Fig. 2Relative expression levels of SIAH1 in various tissues and hair follicle cycle. a Real-time RT-PCR was used to measure mRNA levels of SIAH1 in different tissues. The data represent means ± SD (n = 9). Expression levels in the leg muscle were set to 1.0. b Relative expression levels of Angora rabbit SIAH1 during hair cycling in the dorsal skin. Data represent means ± SD (n = 9). Expression level at day 0 was set to 1.0
Fig. 3Expression levels of SIAH1 mRNA in each group of cells. a The expression of siRNA-SIAH1 in three groups was quantified. siRNA significantly reduced the expression of SIAH1 in DP cells. b pcDNA3.1-SIAH1 significantly reduced the expression of the SIAH1 mRNA level in DP cells. ** indicates a statistically significant difference (P < 0.01)
Expression levels of SIAH1 mRNA in different siRNA groups
| Group | ΔCt | ΔΔCt | Relative expression | Inhibition Ratio (%) |
|---|---|---|---|---|
| siRNA-1 | 8.94 ± 0.15 | 1.52 ± 0.15 | 0.34c | 65.63% |
| siRNA-2 | 9.95 ± 0.16 | 2.54 ± 0.16 | 0.17b | 82.98% |
| siRNA-3 | 10.37 ± 0.17 | 2.96 ± 0.17 | 0.13a | 87.23% |
| siRNA-NC | 7.41 ± 0.26 | 0.00 ± 0.26 | 1.00d | – |
Values with the same lower case letter indicate no significant difference (P > 0.05). Different letters indicate significant differences (P < 0.05). CT cycle threshold, mRNA messenger RNA, siRNA small interfering RNA
Fig. 4Effect of SIAH1 expression on the expression levels of skin and hair follicle development-related genes. a Effect of pcDNA3.1-SIAH1 on the expression levels of WNT2, LEF1, FGF2, SFRP2 and DKK1 genes. b Effect of siRNA-SIAH1 on the expression levels of WNT2, LEF1, FGF2, SFRP2 and DKK1 genes. * indicates a statistically significant difference (P < 0.05), ** indicates a highly statistically significant difference (P < 0.01)
Primers used for RACE
| Name | Sequences of primers (5′-3′) | Application |
|---|---|---|
| GSP1 | TCTGCTGAAGAACTGC | 5′-RACE |
| GSP2 | TCAGGGGCAATCCTCCAC | 5′-RACE |
| GSP3 | GAGAGTGTACTAGGAGTCAAG | 5′-RACE |
| C396–1 | ATGGGCACAGGCGACGATTGACTT | 3′-RACE |
| C396–2 | GAGGGAATTGCGACAGCCATCATG | 3′-RACE |
Primer sequences for qRT-PCR
| Name | Sequences of primers (5′-3′) |
|---|---|
F: CACCAGGGCTGCTTTTAACTCT R: CTTCCCGTTCTCAGCCTTGACC | |
F: ACGACCGCGTCCAACAATGA R: AGCTTTGGGCGACAGTTGCT | |
| WNT2 | F: AGCCATCCAGGTCGTCATGAACCAG R: TGCACACACGACCTGCTGTACCC |
| LEF1 | F: CATCTCGGGTGGATTCAGG R: ATGAGGGATGCCAGTTGTG |
| FGF2 | F: GTGTGTGCAAACCGTTACCTT R: TCGTTTCAGTGCCACATACCAG |
| SFRP2 | F: CCAGCCCGACTTCTCCTACAAGC R: TCCAGCACCTCTTTCATGGTCT |
| DKK1 | F: CACAGAGGACGAGGAGTGTG R: CTTCCTGCAAGCCAGACAGA |
F forward primer, R reverse primer
SIAH1 overexpression and interference related primer sequences
| Name | Sequences of primers (5′-3′) |
|---|---|
F: CCC R: CCG | |
| siRNA-1 | F:GCACGACCGCGUCCAACAATT R:UUGUUGGACGCGGUCGUGCTT |
| siRNA-2 | F:CCUCGUCUGGAUGUGAAAUTT R:AUUUCACAUCCAGACGAGGTT |
| siRNA-3 | F:CCAGCAGUUCUUUGCAAUUTT R:AAUUGCAAAGAACUGCUGGTT |
| siRNA-NC | F:UUCUCCGAACGUGUCACGUTT R:ACGUGACACGUUCGGAGAATT |
Bases in italics and underlined represent the enzyme cutting site. F forward primer, R reverse primer