Literature DB >> 32251142

Machine Learning Analysis Reveals Novel Neuroimaging and Clinical Signatures of Frailty in HIV.

Robert H Paul1,2, Kyu S Cho2, Patrick Luckett3, Jeremy F Strain3, Andrew C Belden2, Jacob D Bolzenius2, Jaimie Navid3, Paola M Garcia-Egan1,2, Sarah A Cooley3, Julie K Wisch3, Anna H Boerwinkle3, Dimitre Tomov3, Abel Obosi2,4, Julie A Mannarino2, Beau M Ances3.   

Abstract

BACKGROUND: Frailty is an important clinical concern for the aging population of people living with HIV (PLWH). The objective of this study was to identify the combination of risk features that distinguish frail from nonfrail individuals.
SETTING: Machine learning analysis of highly dimensional risk features was performed on a clinical cohort of PLWH.
METHODS: Participants included 105 older (average age = 55.6) PLWH, with at least a 3-month history of combination antiretroviral therapy (median CD4 = 546). Predictors included demographics, HIV clinical markers, comorbid health conditions, cognition, and neuroimaging (ie, volumetrics, resting-state functional connectivity, and cerebral blood flow). Gradient-boosted multivariate regressions were implemented to establish linear and interactive classification models. Model performance was determined by sensitivity/specificity (F1 score) with 5-fold cross validation.
RESULTS: The linear gradient-boosted multivariate regression classifier included lower current CD4 count, lower psychomotor performance, and multiple neuroimaging indices (volumes, network connectivity, and blood flow) in visual and motor brain systems (F1 score = 71%; precision = 84%; and sensitivity = 66%). The interactive model identified novel synergies between neuroimaging features, female sex, symptoms of depression, and current CD4 count.
CONCLUSIONS: Data-driven algorithms built from highly dimensional clinical and brain imaging features implicate disruption to the visuomotor system in older PLWH designated as frail individuals. Interactions between lower CD4 count, female sex, depressive symptoms, and neuroimaging features suggest potentiation of risk mechanisms. Longitudinal data-driven studies are needed to guide clinical strategies capable of preventing the development of frailty as PLWH reach advanced age.

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Year:  2020        PMID: 32251142      PMCID: PMC7903919          DOI: 10.1097/QAI.0000000000002360

Source DB:  PubMed          Journal:  J Acquir Immune Defic Syndr        ISSN: 1525-4135            Impact factor:   3.731


  30 in total

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Authors:  Istvan Molnar-Szakacs; Marco Iacoboni; Lisa Koski; John C Mazziotta
Journal:  Cereb Cortex       Date:  2004-10-28       Impact factor: 5.357

2.  Durable Viral Suppression and Transmission Risk Potential Among Persons With Diagnosed HIV Infection: United States, 2012-2013.

Authors:  Nicole Crepaz; Tian Tang; Gary Marks; Michael J Mugavero; Lorena Espinoza; H Irene Hall
Journal:  Clin Infect Dis       Date:  2016-06-29       Impact factor: 9.079

3.  Persistent HIV-infected cells in cerebrospinal fluid are associated with poorer neurocognitive performance.

Authors:  Serena Spudich; Kevin R Robertson; Ronald J Bosch; Rajesh T Gandhi; Joshua C Cyktor; Hanna Mar; Bernard J Macatangay; Christina M Lalama; Charles Rinaldo; Ann C Collier; Catherine Godfrey; Joseph J Eron; Deborah McMahon; Jana L Jacobs; Dianna Koontz; Evelyn Hogg; Alyssa Vecchio; John W Mellors
Journal:  J Clin Invest       Date:  2019-07-15       Impact factor: 14.808

4.  Action (verb naming) fluency as an executive function measure: convergent and divergent evidence of validity.

Authors:  A L Piatt; J A Fields; A M Paolo; A I Tröster
Journal:  Neuropsychologia       Date:  1999-12       Impact factor: 3.139

Review 5.  Relationships between cognition and structural neuroimaging findings in adults with human immunodeficiency virus type-1.

Authors:  Robert Paul; Ronald Cohen; Bradford Navia; Karen Tashima
Journal:  Neurosci Biobehav Rev       Date:  2002-05       Impact factor: 8.989

6.  Demographically corrected norms for African Americans and Caucasians on the Hopkins Verbal Learning Test-Revised, Brief Visuospatial Memory Test-Revised, Stroop Color and Word Test, and Wisconsin Card Sorting Test 64-Card Version.

Authors:  Marc A Norman; David J Moore; Michael Taylor; Donald Franklin; Lucette Cysique; Chris Ake; Deborah Lazarretto; Florin Vaida; Robert K Heaton
Journal:  J Clin Exp Neuropsychol       Date:  2011-06-24       Impact factor: 2.475

7.  Time above 1500 copies: a viral load measure for assessing transmission risk of HIV-positive patients in care.

Authors:  Gary Marks; Lytt I Gardner; Charles E Rose; Anne Zinski; Richard D Moore; Susan Holman; Allan E Rodriguez; Meg Sullivan; Thomas P Giordano
Journal:  AIDS       Date:  2015-05-15       Impact factor: 4.177

8.  Functional impairment, disability, and frailty in adults aging with HIV-infection.

Authors:  Kristine M Erlandson; Jennifer A Schrack; Catherine M Jankowski; Todd T Brown; Thomas B Campbell
Journal:  Curr HIV/AIDS Rep       Date:  2014-09       Impact factor: 5.071

9.  Deep Learning Analysis of Cerebral Blood Flow to Identify Cognitive Impairment and Frailty in Persons Living With HIV.

Authors:  Patrick Luckett; Robert H Paul; Jaimie Navid; Sarah A Cooley; Julie K Wisch; Anna H Boerwinkle; Dimitre Tomov; Beau M Ances
Journal:  J Acquir Immune Defic Syndr       Date:  2019-12-15       Impact factor: 3.731

Review 10.  The State of Resting State Networks.

Authors:  Benjamin A Seitzman; Abraham Z Snyder; Eric C Leuthardt; Joshua S Shimony
Journal:  Top Magn Reson Imaging       Date:  2019-08
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  10 in total

Review 1.  Neuroimaging the Neuropathogenesis of HIV.

Authors:  Anna H Boerwinkle; Karin L Meeker; Patrick Luckett; Beau M Ances
Journal:  Curr HIV/AIDS Rep       Date:  2021-02-25       Impact factor: 5.071

2.  Cognitive Phenotypes of HIV Defined Using a Novel Data-driven Approach.

Authors:  Robert H Paul; Kyu Cho; Andrew Belden; Adam W Carrico; Eileen Martin; Jacob Bolzenius; Patrick Luckett; Sarah A Cooley; Julie Mannarino; Jodi M Gilman; Mariah Miano; Beau M Ances
Journal:  J Neuroimmune Pharmacol       Date:  2022-01-04       Impact factor: 4.147

3.  Multi-label, multi-domain learning identifies compounding effects of HIV and cognitive impairment.

Authors:  Jiequan Zhang; Qingyu Zhao; Ehsan Adeli; Adolf Pfefferbaum; Edith V Sullivan; Robert Paul; Victor Valcour; Kilian M Pohl
Journal:  Med Image Anal       Date:  2021-10-13       Impact factor: 8.545

4.  Individual Differences in CD4/CD8 T-Cell Ratio Trajectories and Associated Risk Profiles Modeled From Acute HIV Infection.

Authors:  Robert Paul; Kyu Cho; Jacob Bolzenius; Carlo Sacdalan; Lishomwa C Ndhlovu; Lydie Trautmann; Shelly Krebs; Somporn Tipsuk; Trevor A Crowell; Duanghathai Suttichom; Donn J Colby; Thomas A Premeaux; Nittaya Phanuphak; Phillip Chan; Eugène Kroon; Sandhya Vasan; Denise Hsu; Adam Carrico; Victor Valcour; Jintanat Ananworanich; Merlin L Robb; Julie A Ake; Somchai Sriplienchan; Serena Spudich
Journal:  Psychosom Med       Date:  2022-07-06       Impact factor: 3.864

5.  Cardiorespiratory Fitness Is Associated With Better White Matter Integrity in Persons Living With HIV.

Authors:  Collin B Kilgore; Jeremy F Strain; Brittany Nelson; Sarah A Cooley; Alexander Rosenow; Michelle Glans; William Todd Cade; Dominic N Reeds; Robert H Paul; Beau M Ances
Journal:  J Acquir Immune Defic Syndr       Date:  2022-04-15       Impact factor: 3.771

6.  Neurocognitive Trajectories After 72 Weeks of First-Line Anti-retroviral Therapy in Vietnamese Adults With HIV-HCV Co-infection.

Authors:  Robert H Paul; Cecilia M Shikuma; Nguyen Van Vinh Chau; Lishomwa C Ndhlovu; Nguyen Tat Thanh; Andrew C Belden; Dominic C Chow; Glen M Chew; Thomas A Premeaux; Vo Trieu Ly; Joseph A D McBride; Jacob D Bolzenius; Thuy Le
Journal:  Front Neurol       Date:  2021-03-12       Impact factor: 4.003

7.  Using machine learning approaches to predict timely clinic attendance and the uptake of HIV/STI testing post clinic reminder messages.

Authors:  Lei Zhang; Jason J Ong; Xianglong Xu; Christopher K Fairley; Eric P F Chow; David Lee; Ei T Aung
Journal:  Sci Rep       Date:  2022-05-24       Impact factor: 4.996

8.  Ensemble machine learning classification of daily living abilities among older people with HIV.

Authors:  Robert Paul; Torie Tsuei; Kyu Cho; Andrew Belden; Benedetta Milanini; Jacob Bolzenius; Shireen Javandel; Joseph McBride; Lucette Cysique; Samantha Lesinski; Victor Valcour
Journal:  EClinicalMedicine       Date:  2021-05-07

9.  Machine Learning Classification of False-Positive Human Immunodeficiency Virus Screening Results.

Authors:  Mahmoud Elkhadrawi; Bryan A Stevens; Bradley J Wheeler; Murat Akcakaya; Sarah Wheeler
Journal:  J Pathol Inform       Date:  2021-11-20

Review 10.  Co-Infection and Cancer: Host-Pathogen Interaction between Dendritic Cells and HIV-1, HTLV-1, and Other Oncogenic Viruses.

Authors:  Tania H Mulherkar; Daniel Joseph Gómez; Grace Sandel; Pooja Jain
Journal:  Viruses       Date:  2022-09-14       Impact factor: 5.818

  10 in total

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