Literature DB >> 32246291

PRIMAGE project: predictive in silico multiscale analytics to support childhood cancer personalised evaluation empowered by imaging biomarkers.

Luis Martí-Bonmatí1, Ángel Alberich-Bayarri2, Ruth Ladenstein3, Ignacio Blanquer4, J Damian Segrelles4, Leonor Cerdá-Alberich5, Polyxeni Gkontra5, Barbara Hero6, J M García-Aznar7,8, Daniel Keim9, Wolfgang Jentner9, Karine Seymour10, Ana Jiménez-Pastor2, Ismael González-Valverde2, Blanca Martínez de Las Heras11, Samira Essiaf12, Dawn Walker13, Michel Rochette14, Marian Bubak15, Jordi Mestres16, Marco Viceconti17, Gracia Martí-Besa5, Adela Cañete11, Paul Richmond13, Kenneth Y Wertheim13, Tomasz Gubala15, Marek Kasztelnik15, Jan Meizner15, Piotr Nowakowski15, Salvador Gilpérez18, Amelia Suárez18, Mario Aznar18, Giuliana Restante19, Emanuele Neri19.   

Abstract

PRIMAGE is one of the largest and more ambitious research projects dealing with medical imaging, artificial intelligence and cancer treatment in children. It is a 4-year European Commission-financed project that has 16 European partners in the consortium, including the European Society for Paediatric Oncology, two imaging biobanks, and three prominent European paediatric oncology units. The project is constructed as an observational in silico study involving high-quality anonymised datasets (imaging, clinical, molecular, and genetics) for the training and validation of machine learning and multiscale algorithms. The open cloud-based platform will offer precise clinical assistance for phenotyping (diagnosis), treatment allocation (prediction), and patient endpoints (prognosis), based on the use of imaging biomarkers, tumour growth simulation, advanced visualisation of confidence scores, and machine-learning approaches. The decision support prototype will be constructed and validated on two paediatric cancers: neuroblastoma and diffuse intrinsic pontine glioma. External validation will be performed on data recruited from independent collaborative centres. Final results will be available for the scientific community at the end of the project, and ready for translation to other malignant solid tumours.

Entities:  

Keywords:  Artificial intelligence; Biomarkers (tumour); Cloud computing; Diffuse intrinsic pontine glioma; Neuroblastoma

Mesh:

Substances:

Year:  2020        PMID: 32246291      PMCID: PMC7125275          DOI: 10.1186/s41747-020-00150-9

Source DB:  PubMed          Journal:  Eur Radiol Exp        ISSN: 2509-9280


  27 in total

1.  Knowledge Generation Model for Visual Analytics.

Authors:  Dominik Sacha; Andreas Stoffel; Florian Stoffel; Bum Chul Kwon; Geoffrey Ellis; Daniel A Keim
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-12       Impact factor: 4.579

2.  Support for Taverna workflows in the VPH-Share cloud platform.

Authors:  Marek Kasztelnik; Ernesto Coto; Marian Bubak; Maciej Malawski; Piotr Nowakowski; Juan Arenas; Alfredo Saglimbeni; Debora Testi; Alejandro F Frangi
Journal:  Comput Methods Programs Biomed       Date:  2017-05-20       Impact factor: 5.428

3.  Image-defined risk factors in unresectable neuroblastoma: SIOPEN study on incidence, chemotherapy-induced variation, and impact on surgical outcomes.

Authors:  Stefano Avanzini; Luca Pio; Giovanni Erminio; Claudio Granata; Keith Holmes; Marion Gambart; Piero Buffa; Victoria Castel; Dominique Valteau Couanet; Alberto Garaventa; Angela Pistorio; Giovanni Cecchetto; Giuseppe Martucciello; Girolamo Mattioli; Sabine Sarnacki
Journal:  Pediatr Blood Cancer       Date:  2017-04-25       Impact factor: 3.167

4.  Using Big Data to Emulate a Target Trial When a Randomized Trial Is Not Available.

Authors:  Miguel A Hernán; James M Robins
Journal:  Am J Epidemiol       Date:  2016-03-18       Impact factor: 4.897

Review 5.  Predictive models in cancer management: A guide for clinicians.

Authors:  Mohammed Ali Kazem
Journal:  Surgeon       Date:  2016-07-05       Impact factor: 2.392

6.  Treatment of children over the age of one year with unresectable localised neuroblastoma without MYCN amplification: results of the SIOPEN study.

Authors:  J A Kohler; H Rubie; V Castel; K Beiske; K Holmes; C Gambini; F Casale; C Munzer; G Erminio; S Parodi; S Navarro; C Marquez; M Peuchmaur; C Cullinane; P Brock; D Valteau-Couanet; A Garaventa; R Haupt
Journal:  Eur J Cancer       Date:  2013-07-29       Impact factor: 9.162

7.  Poor survival for infants with MYCN-amplified metastatic neuroblastoma despite intensified treatment: the International Society of Paediatric Oncology European Neuroblastoma Experience.

Authors:  Adela Canete; Mary Gerrard; Hervé Rubie; Victoria Castel; Andrea Di Cataldo; Caroline Munzer; Ruth Ladenstein; Bénédicte Brichard; José D Bermúdez; Jerôme Couturier; Bruno de Bernardi; Andrew J Pearson; Jean Michon
Journal:  J Clin Oncol       Date:  2009-01-26       Impact factor: 44.544

8.  Excellent outcome with reduced treatment for infants with disseminated neuroblastoma without MYCN gene amplification.

Authors:  Bruno De Bernardi; Mary Gerrard; Luca Boni; Hervé Rubie; Adela Cañete; Andrea Di Cataldo; Victoria Castel; Ana Forjaz de Lacerda; Ruth Ladenstein; Ellen Ruud; Benédicte Brichard; Jerome Couturier; Caroline Ellershaw; Caroline Munzer; Paolo Bruzzi; Jean Michon; Andrew D J Pearson
Journal:  J Clin Oncol       Date:  2009-01-26       Impact factor: 44.544

Review 9.  Biomarkers in preclinical cancer imaging.

Authors:  Monique R Bernsen; Klazina Kooiman; Marcel Segbers; Fijs W B van Leeuwen; Marion de Jong
Journal:  Eur J Nucl Med Mol Imaging       Date:  2015-02-12       Impact factor: 9.236

10.  Balance of mechanical forces drives endothelial gap formation and may facilitate cancer and immune-cell extravasation.

Authors:  Jorge Escribano; Michelle B Chen; Emad Moeendarbary; Xuan Cao; Vivek Shenoy; Jose Manuel Garcia-Aznar; Roger D Kamm; Fabian Spill
Journal:  PLoS Comput Biol       Date:  2019-05-02       Impact factor: 4.475

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  10 in total

Review 1.  Bridging gaps between images and data: a systematic update on imaging biobanks.

Authors:  Michela Gabelloni; Lorenzo Faggioni; Rita Borgheresi; Giuliana Restante; Jorge Shortrede; Lorenzo Tumminello; Camilla Scapicchio; Francesca Coppola; Dania Cioni; Ignacio Gómez-Rico; Luis Martí-Bonmatí; Emanuele Neri
Journal:  Eur Radiol       Date:  2022-01-10       Impact factor: 5.315

2.  MR Denoising Increases Radiomic Biomarker Precision and Reproducibility in Oncologic Imaging.

Authors:  Matías Fernández Patón; Leonor Cerdá Alberich; Cinta Sangüesa Nebot; Blanca Martínez de Las Heras; Diana Veiga Canuto; Adela Cañete Nieto; Luis Martí-Bonmatí
Journal:  J Digit Imaging       Date:  2021-09-10       Impact factor: 4.903

3.  A practical solution to estimate the sample size required for clinical prediction models generated from observational research on data.

Authors:  Carlos Baeza-Delgado; Leonor Cerdá Alberich; José Miguel Carot-Sierra; Diana Veiga-Canuto; Blanca Martínez de Las Heras; Ben Raza; Luis Martí-Bonmatí
Journal:  Eur Radiol Exp       Date:  2022-06-01

Review 4.  Artificial intelligence in paediatric radiology: Future opportunities.

Authors:  Natasha Davendralingam; Neil J Sebire; Owen J Arthurs; Susan C Shelmerdine
Journal:  Br J Radiol       Date:  2020-09-17       Impact factor: 3.039

5.  The EurValve model execution environment.

Authors:  M Bubak; K Czechowicz; T Gubała; D R Hose; M Kasztelnik; M Malawski; J Meizner; P Nowakowski; S Wood
Journal:  Interface Focus       Date:  2020-12-11       Impact factor: 3.906

6.  DICOM-MIABIS integration model for biobanks: a use case of the EU PRIMAGE project.

Authors:  Camilla Scapicchio; Michela Gabelloni; Sara Maria Forte; Leonor Cerdá Alberich; Lorenzo Faggioni; Rita Borgheresi; Paola Erba; Fabiola Paiar; Luis Marti-Bonmati; Emanuele Neri
Journal:  Eur Radiol Exp       Date:  2021-05-12

7.  CHAIMELEON Project: Creation of a Pan-European Repository of Health Imaging Data for the Development of AI-Powered Cancer Management Tools.

Authors:  Luis Martí Bonmatí; Ana Miguel; Amelia Suárez; Mario Aznar; Jean Paul Beregi; Laure Fournier; Emanuele Neri; Andrea Laghi; Manuela França; Francesco Sardanelli; Tobias Penzkofer; Phillipe Lambin; Ignacio Blanquer; Marion I Menzel; Karine Seymour; Sergio Figueiras; Katharina Krischak; Ricard Martínez; Yisroel Mirsky; Guang Yang; Ángel Alberich-Bayarri
Journal:  Front Oncol       Date:  2022-02-24       Impact factor: 6.244

8.  Comparative Multicentric Evaluation of Inter-Observer Variability in Manual and Automatic Segmentation of Neuroblastic Tumors in Magnetic Resonance Images.

Authors:  Diana Veiga-Canuto; Leonor Cerdà-Alberich; Cinta Sangüesa Nebot; Blanca Martínez de Las Heras; Ulrike Pötschger; Michela Gabelloni; José Miguel Carot Sierra; Sabine Taschner-Mandl; Vanessa Düster; Adela Cañete; Ruth Ladenstein; Emanuele Neri; Luis Martí-Bonmatí
Journal:  Cancers (Basel)       Date:  2022-07-27       Impact factor: 6.575

Review 9.  Radiologists and Clinical Trials: Part 1 The Truth About Reader Disagreements.

Authors:  Annette M Schmid; David L Raunig; Colin G Miller; Richard C Walovitch; Robert W Ford; Michael O'Connor; Guenther Brueggenwerth; Josy Breuer; Liz Kuney; Robert R Ford
Journal:  Ther Innov Regul Sci       Date:  2021-07-06       Impact factor: 1.778

Review 10.  A deep look into radiomics.

Authors:  Camilla Scapicchio; Michela Gabelloni; Andrea Barucci; Dania Cioni; Luca Saba; Emanuele Neri
Journal:  Radiol Med       Date:  2021-07-02       Impact factor: 3.469

  10 in total

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