Literature DB >> 32238952

Nanoscale imaging of clinical specimens using conventional and rapid-expansion pathology.

Octavian Bucur1,2,3,4, Feifei Fu5, Mike Calderon6, Geetha H Mylvaganam7,8, Ngoc L Ly7,8, Jimmy Day9, Simon Watkin6, Bruce D Walker7,8,10, Edward S Boyden11,12,13,14,15,16, Yongxin Zhao17,18.   

Abstract

In pathology, microscopy is an important tool for the analysis of human tissues, both for the scientific study of disease states and for diagnosis. However, the microscopes commonly used in pathology are limited in resolution by diffraction. Recently, we discovered that it was possible, through a chemical process, to isotropically expand preserved cells and tissues by 4-5× in linear dimension. We call this process expansion microscopy (ExM). ExM enables nanoscale resolution imaging on conventional microscopes. Here we describe protocols for the simple and effective physical expansion of a variety of human tissues and clinical specimens, including paraffin-embedded, fresh frozen and chemically stained human tissues. These protocols require only inexpensive, commercially available reagents and hardware commonly found in a routine pathology laboratory. Our protocols are written for researchers and pathologists experienced in conventional fluorescence microscopy. The conventional protocol, expansion pathology, can be completed in ~1 d with immunostained tissue sections and 2 d with unstained specimens. We also include a new, fast variant, rapid expansion pathology, that can be performed on <5-µm-thick tissue sections, taking <4 h with immunostained tissue sections and <8 h with unstained specimens.

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Year:  2020        PMID: 32238952     DOI: 10.1038/s41596-020-0300-1

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  6 in total

1.  Expansion Microscopy: Toward Nanoscale Imaging of a Diverse Range of Biomolecules.

Authors:  Aleksandra Klimas; Yongxin Zhao
Journal:  ACS Nano       Date:  2020-07-06       Impact factor: 15.881

2.  Three-Dimensional Super-Resolved Imaging of Paraffin-Embedded Kidney Samples.

Authors:  David Unnersjö-Jess; Amer Ramdedovic; Martin Höhne; Linus Butt; Felix C Koehler; Roman-Ulrich Müller; Peter F Hoyer; Hans Blom; Bernhard Schermer; Thomas Benzing
Journal:  Kidney360       Date:  2021-12-01

Review 3.  Nanoscale fluorescence imaging of biological ultrastructure via molecular anchoring and physical expansion.

Authors:  Wei Wang; Yat Ho Chan; SoYoung Kwon; Jamuna Tandukar; Ruixuan Gao
Journal:  Nano Converg       Date:  2022-07-09

4.  Neurophotonic tools for microscopic measurements and manipulation: status report.

Authors:  Ahmed S Abdelfattah; Sapna Ahuja; Taner Akkin; Srinivasa Rao Allu; Joshua Brake; David A Boas; Erin M Buckley; Robert E Campbell; Anderson I Chen; Xiaojun Cheng; Tomáš Čižmár; Irene Costantini; Massimo De Vittorio; Anna Devor; Patrick R Doran; Mirna El Khatib; Valentina Emiliani; Natalie Fomin-Thunemann; Yeshaiahu Fainman; Tomas Fernandez-Alfonso; Christopher G L Ferri; Ariel Gilad; Xue Han; Andrew Harris; Elizabeth M C Hillman; Ute Hochgeschwender; Matthew G Holt; Na Ji; Kıvılcım Kılıç; Evelyn M R Lake; Lei Li; Tianqi Li; Philipp Mächler; Evan W Miller; Rickson C Mesquita; K M Naga Srinivas Nadella; U Valentin Nägerl; Yusuke Nasu; Axel Nimmerjahn; Petra Ondráčková; Francesco S Pavone; Citlali Perez Campos; Darcy S Peterka; Filippo Pisano; Ferruccio Pisanello; Francesca Puppo; Bernardo L Sabatini; Sanaz Sadegh; Sava Sakadzic; Shy Shoham; Sanaya N Shroff; R Angus Silver; Ruth R Sims; Spencer L Smith; Vivek J Srinivasan; Martin Thunemann; Lei Tian; Lin Tian; Thomas Troxler; Antoine Valera; Alipasha Vaziri; Sergei A Vinogradov; Flavia Vitale; Lihong V Wang; Hana Uhlířová; Chris Xu; Changhuei Yang; Mu-Han Yang; Gary Yellen; Ofer Yizhar; Yongxin Zhao
Journal:  Neurophotonics       Date:  2022-04-27       Impact factor: 4.212

5.  Super-resolved fluorescence imaging of peripheral nerve.

Authors:  Iván Coto Hernández; Suresh Mohan; Steven Minderler; Nate Jowett
Journal:  Sci Rep       Date:  2022-07-21       Impact factor: 4.996

Review 6.  Expansion microscopy: A powerful nanoscale imaging tool for neuroscientists.

Authors:  Brendan R Gallagher; Yongxin Zhao
Journal:  Neurobiol Dis       Date:  2021-04-02       Impact factor: 5.996

  6 in total

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