Literature DB >> 32235077

DCT-MIL: deep CNN transferred multiple instance learning for COPD identification using CT images.

Caiwen Xu1, Shouliang Qi1, Jie Feng2, Shuyue Xia3, Yan Kang4, Yudong Yao5, Wei Qian6.   

Abstract

While many pre-defined computed tomographic (CT) measures have been utilized to characterize chronic obstructive pulmonary disease (COPD), it is still challenging to represent pathological alternations of multiple dimensions and highly spatial heterogeneity. Deep CNN transferred multiple instance learning (DCT-MIL) is proposed to identify COPD via CT images. After the lung is divided into 8 sections along the axial direction, one random axial CT image is taken out from each section as one instance. With one instance as the input, the activations of neural layers of AlexNet trained by natural images are extracted as features. After dimension reduction through principle component analysis (PCA), features of all instances are input into three MIL methods: Citation k-Nearest-Neighbor (Citation-KNN), multiple instance support vector machine, and expectation-maximization diverse density. Moreover, the performance dependence of the resulted models on the depth of the neural layer where activations are extracted and the number of features is investigated. The proposed DCT-MIL achieves an exceptional performance with an accuracy of 99.29% and area under curve of 0.9826 while using 100 principle components of features extracted from the fourth convolutional layer and Citation-KNN. It outperforms not only DCT-MIL models using other settings and the pre-trained AlexNet with fine-tuning by montages of 8 lung CT images, but also other state-of-art methods. Deep CNN transferred multiple instance learning is suited for identification of COPD using CT images. It can help finding subgroups with high risk of COPD from large populations through CT scans ordered doing lung cancer screening.
© 2020 Institute of Physics and Engineering in Medicine.

Entities:  

Keywords:  COPD; CT; convolutional neural networks; multiple instance learning; transfer learning

Year:  2020        PMID: 32235077     DOI: 10.1088/1361-6560/ab857d

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  5 in total

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Journal:  Front Immunol       Date:  2022-06-14       Impact factor: 8.786

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Authors:  Zongli Li; Kewu Huang; Ligong Liu; Zuoqing Zhang
Journal:  Med Biol Eng Comput       Date:  2022-06-24       Impact factor: 3.079

3.  Deep CNN Model Using CT Radiomics Feature Mapping Recognizes EGFR Gene Mutation Status of Lung Adenocarcinoma.

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Journal:  Front Oncol       Date:  2021-02-12       Impact factor: 6.244

4.  A 3D-CNN model with CT-based parametric response mapping for classifying COPD subjects.

Authors:  Thao Thi Ho; Taewoo Kim; Woo Jin Kim; Chang Hyun Lee; Kum Ju Chae; So Hyeon Bak; Sung Ok Kwon; Gong Yong Jin; Eun-Kee Park; Sanghun Choi
Journal:  Sci Rep       Date:  2021-01-08       Impact factor: 4.379

5.  Deep Learning-Based Computed Tomography Features in Evaluating Early Screening and Risk Factors for Chronic Obstructive Pulmonary Disease.

Authors:  Changhong Zhang; Jianhua Liu; Liang Cao; Gaixia Feng; Zhihua Zhang; Mengmeng Ji; Yaping Zhang
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  5 in total

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