| Literature DB >> 32235021 |
Seung-Young Roh1,2, Ji Yeon Kim3,2, Hyo Kyeong Cha3, Hye Young Lim3, Youngran Park3, Kwang-No Lee4, Jaemin Shim4, Jong-Il Choi4, Young-Hoon Kim4, Gi Hoon Son3,5.
Abstract
The sinus node (SN) is located at the apex of the cardiac conduction system, and SN dysfunction (SND)-characterized by electrical remodeling-is generally attributed to idiopathic fibrosis or ischemic injuries in the SN. SND is associated with increased risk of cardiovascular disorders, including syncope, heart failure, and atrial arrhythmias, particularly atrial fibrillation. One of the histological SND hallmarks is degenerative atrial remodeling that is associated with conduction abnormalities and increased right atrial refractoriness. Although SND is frequently accompanied by increased fibrosis in the right atrium (RA), its molecular basis still remains elusive. Therefore, we investigated whether SND can induce significant molecular changes that account for the structural remodeling of RA. Towards this, we employed a rabbit model of experimental SND, and then compared the genome-wide RNA expression profiles in RA between SND-induced rabbits and sham-operated controls to identify the differentially expressed transcripts. The accompanying gene enrichment analysis revealed extensive pro-fibrotic changes within 7 days after the SN ablation, including activation of transforming growth factor-β (TGF-β) signaling and alterations in the levels of extracellular matrix components and their regulators. Importantly, our findings suggest that periostin, a matricellular factor that regulates the development of cardiac tissue, might play a key role in mediating TGF-β-signaling-induced aberrant atrial remodeling. In conclusion, the present study provides valuable information regarding the molecular signatures underlying SND-induced atrial remodeling, and indicates that periostin can be potentially used in the diagnosis of fibroproliferative cardiac dysfunctions.Entities:
Keywords: cardiac fibrosis; periostin; right atrium; sinus node dysfunction; transcriptome; transforming growth factor-β
Mesh:
Year: 2020 PMID: 32235021 PMCID: PMC7191046 DOI: 10.14348/molcells.2020.2164
Source DB: PubMed Journal: Mol Cells ISSN: 1016-8478 Impact factor: 5.034
Fig. 1Cardiac dysfunctions induced by sinus node damage.
(A) Average heart rate (HR) before the experimental sinus node damage (SNX; upper panel), and the duration (%) for which bradycardia is exhibited 7 days after SND induction (lower panel) in comparison with that in sham-operated controls (CTL). Sinus bradycardia was considered developed at HR < 130 bpm. Data are expressed as mean ± SEM (n = 3 for CTL and 5 for SNX groups; **P < 0.01 by t-test). (B) Increased fibrosis in the RA tissues by SNX. The RA sections were stained with H&E (upper panel) or MTS (lower panel). Scale bars = 50 µm.
Fig. 2Genome-wide RNA expression profiles in RA tissues.
(A) Venn diagram (upper panel) and heat map representation with hierarchical clustering (lower panel) of the differentially expressed genes (DEGs) examined 7 days after SNX. RNA levels of 143 genes were significantly higher in the sham-operated controls (CTLs), and 498 RNA levels were higher in the rabbits with SNX. (B) Heat map representation of the top 30 DEGs.
Top canonical pathways
| Ingenuity canonical pathway | Z scoreb | Overlap | |
|---|---|---|---|
| GP6 signaling pathway | 5.89E-06 | 4.00 | 16/82 (0.195) |
| Actin cytoskeleton signaling | 1.00E-05 | 3.44 | 23/157 (0.146) |
| Th17 activation pathway | 2.24E-05 | 2.33 | 10/38 (0.263) |
| Leukocyte extravasation signaling | 6.76E-05 | 3.90 | 19/131 (0.145) |
| ILK signaling | 8.32E-05 | 2.67 | 20/144 (0.139) |
| Macropinocytosis signaling | 1.29E-04 | 2.65 | 12/64 (0.188) |
| TREM1 signaling | 2.63E-04 | 3.00 | 9/41 (0.220) |
| Rac signaling | 2.95E-04 | 3.61 | 14/90 (0.156) |
| Agrin interactions at neuromuscular junction | 4.47E-04 | 3.16 | 10/53 (0.189) |
| Neuroinflammation signaling | 5.75E-04 | 3.27 | 22/191 (0.115) |
P < 0.05 by Fisher’s exact test. b|Activation Z score| > 2.
Top diseases and biological functions
| Category | No. of molecules | |
|---|---|---|
| Diseases and disorders | ||
| Inflammatory response | 1.70E-06 – 1.50E-18 | 208 |
| Developmental disorder | 2.53E-06 – 3.48E-17 | 72 |
| Hereditary disorder | 2.53E-06 – 3.48E-17 | 116 |
| Organismal injury and abnormalities | 2.55E-06 – 3.48E-17 | 442 |
| Skeletal and muscular disorder | 2.53E-06 – 3.48E-17 | 184 |
| Molecular and cellular functions | ||
| Cellular movement | 1.99E-06 – 5.12E-28 | 209 |
| Cell-to-cell signaling and interaction | 2.46E-06 – 8.25E-16 | 151 |
| Cellular development | 2.35E-06 – 1.42E-14 | 212 |
| Cellular assembly and organization | 1.31E-06 – 2.96E-12 | 80 |
| Cellular function and maintenance | 2.04E-06 – 2.96E−12 | 152 |
| Physiological system development and function | ||
| Cardiovascular system and function | 1.48E-06 – 2.58E-20 | 157 |
| Organismal development | 1.51E-06 – 2.58E-20 | 207 |
| Tissue development | 1.84E-06 – 1.36E-19 | 233 |
| Connective tissue development and function | 1.84E-06 – 3.13E-19 | 161 |
| Skeletal & muscular system development and function | 2.27E-06 – 3.13E-19 | 108 |
P < 0.05 by Fisher’s exact test.
Top 10 upstream regulators with altered mRNA expression
| Symbol | FC[ | Type |
| Z score[ | No. of targets |
|---|---|---|---|---|---|
| TGFB1 | 3.05 | Growth factor | 2.19E-29 | 5.52 | 80 |
| AHR | 2.99 | Nuclear receptor | 1.77E-11 | 2.56 | 36 |
| CTGF | 4.48 | Growth factor | 2.77E-09 | 2.08 | 15 |
| IL6R | 2.39 | Transmembrane receptor | 1.29E-08 | 2.02 | 11 |
| SPP1 | 9.27 | Cytokine | 1.11E-07 | 2.31 | 17 |
| HIF1A | 2.79 | Transcription regulator | 1.15E-07 | 3.27 | 32 |
| FBN1 | 2.82 | Other | 1.50E-07 | −2.61 | 8 |
| ETV5 | 2.60 | Transcription regulator | 3.13E-06 | 2.33 | 13 |
| FN1 | 22.28 | Enzyme | 1.09E-05 | 2.20 | 8 |
| FOXM1 | 3.55 | Transcription regulator | 1.19E-05 | 3.48 | 14 |
Fold changes (FCs) in mRNA expression. b P < 0.05 by Fisher’s exact test. c|Activation Z score| > 2.
Fig. 3Validation of the differential expression of selected mRNA species.
qRT-PCR analyses of the selected DEGs categorized as secretory factors (a), membrane receptors and associated proteins (b), factors involved in extracellular matrix organization (c), actin cytoskeletal subunits (d), and other regulatory factors (e). Relative expression of each mRNA species was normalized to that of the average GAPDH, PPIA, and TBP expression and presented as mean ± SEM in arbitrary units (A.U.), for which the mean expression in the control (CTL) was defined as 1 (n = 3 for CTL [C] and 5 for SND [S] groups; *P < 0.05 and **P < 0.01 by unpaired t-test).
Fig. 4Periostin and TGF-β 1 expression at protein levels in cardiac tissues.
(A)Representativeimagesdepictingthe expressionofperiostin,TGF-β1,andβ-actinproteinsinvarious myocardial tissues as evaluated by immunoblot (RA, right atrium; LA, left atrium; RV, right ventricle; LV, left ventricle). (B) Expression ofperiostinandTGF-β1proteinsnormalizedtothatofβ-actin ispresentedasmean±SEMinarbitraryunits(A.U.),forwhich the mean expression in the control (CTL) was defined as 1 (n = 3 for CTL and 5 for the SNX groups; *P < 0.05 and **P < 0.01 by
unpaired t-test).