Literature DB >> 32233527

Construction of lncRNA regulatory networks reveal the key lncRNAs associated with Pituitary adenomas progression.

Yong Hua Xue1, Yi Qin Ge1.   

Abstract

Pituitary adenomas (PA) is one of the most frequent types of intracranial neoplasms. Long noncoding RNAs (lncRNAs) played important roles in the progression of human cancers, including PA. However, the roles of lncRNAs in PA remained to be further investigated. We performed analysis of GSE26966 dataset to identify differently expressed lncRNAs in PA. Co-expression network, lncRNA-RNA binding proteins network, and competing endogenous RNA networks were constructed. Moreover, we performed RT-qPCR assay to validate four key lncRNAs expression in PA. This study identified differently expressed mRNAs and lncRNAs by using GSE26966 database. Furthermore, we constructed lncRNA-mRNA co-expression, lncRNA-RBP interaction and ceRNA networks. Bioinformatics analysis showed these lncRNAs were involved in regulating mechanical stimulus, gene expression, JAK-STAT cascade, cell cycle arrest, FoxO signaling, HIF-1 signaling, Insulin signaling, Oxytocin signaling, and MAPK signaling. We also showed KCNQ1OT1, SNHG7, MEG3, and SNHG5 were down-regulated in PA. Our findings could provide a novel insight to understand the mechanisms of lncRNAs underlying PA pathogenesis and identify new biomarkers for PA.

Entities:  

Keywords:  Pituitary adenomas ; biomarker ; co-expression ; competing endogenous RNA ; long non-coding RNAs

Mesh:

Substances:

Year:  2020        PMID: 32233527     DOI: 10.3934/mbe.2020113

Source DB:  PubMed          Journal:  Math Biosci Eng        ISSN: 1547-1063            Impact factor:   2.080


  5 in total

1.  lncRNA-mRNA Expression Patterns in Invasive Pituitary Adenomas: A Microarray Analysis.

Authors:  Chao Peng; Shuaikai Wang; Jinxiu Yu; Xiaoyi Deng; Huiyu Ye; Zhishan Chen; Hongru Yao; Hanjia Cai; Yanli Li; Yong Yuan
Journal:  Biomed Res Int       Date:  2022-05-05       Impact factor: 3.246

2.  LncRNA PCAT6 regulates the progression of pituitary adenomas by regulating the miR-139-3p/BRD4 axis.

Authors:  Peng Zhao; Jianhua Cheng; Bin Li; Ding Nie; Hongyun Wang; Chuzhong Li; Songbai Gui; Yazhuo Zhang
Journal:  Cancer Cell Int       Date:  2021-01-06       Impact factor: 5.722

3.  LncRNA KCNQ1OT1 (potassium voltage-gated channel subfamily Q member 1 opposite strand/antisense transcript 1) aggravates acute kidney injury by activating p38/NF-κB pathway via miR-212-3p/MAPK1 (mitogen-activated protein kinase 1) axis in sepsis.

Authors:  Haixia Wang; Hongbin Mou; Xiaolan Xu; Changhua Liu; Gang Zhou; Bo Gao
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

4.  KCNQ1OT1 lncRNA affects the proliferation, apoptosis, and chemoresistance of small cell lung cancer cells via the JAK2/STAT3 axis.

Authors:  Yaru Zhu; Yefeng Shen; Rui Chen; Hui Li; Yuanzhou Wu; Fuwei Zhang; Weimei Huang; Linlang Guo; Qunqing Chen; Huanxin Liu
Journal:  Ann Transl Med       Date:  2021-05

Review 5.  Oncogenic Roles of Small Nucleolar RNA Host Gene 7 (SNHG7) Long Noncoding RNA in Human Cancers and Potentials.

Authors:  Sajad Najafi; Soudeh Ghafouri-Fard; Bashdar Mahmud Hussen; Hazha Hadayat Jamal; Mohammad Taheri; Mohammad Hallajnejad
Journal:  Front Cell Dev Biol       Date:  2022-01-17
  5 in total

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