Literature DB >> 32224274

Proteomic identification and expression of oral apparatus constituents in cell regeneration of giant ciliate Stentor coeruleus (strain WHEL).

Wei Wei1, Chuanqi Jiang2, Wentao Yang1, Wei Miao3, Jie Xiong4.   

Abstract

The giant ciliate Stentor coeruleus (S. coeruleus) is a suitable model organism for studying morphogenesis and regeneration at the single-cell level. It contains a prominent structure on the anterior end of the cell, known as the oral apparatus (OA). OA can be induced to shed by urea treatment and then new OA regenerates via a series of defined morphological events and the cell resumes normal feeding activity. We identified OA constituents in S. coeruleus by mass spectrometry. A total of 882 OA-associated proteins were identified; the homologs of 181 of these are known OA constituents in other organisms. The expression pattern of OA-associated genes during regeneration was investigated using single-cell transcriptome sequencing. The expression of most OA-associated genes was high during regeneration, indicating their stable expression after OA shedding. We also identified OA-associated differentially expressed genes that may be involved in regulating OA reconstruction. In summary, this study gives preliminary insight into the molecular basis of OA in S. coeruleus.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Gene Expression; Oral Apparatus Associated Genes; Proteome; Protozoan; Single-cell RNA-sequencing

Year:  2020        PMID: 32224274     DOI: 10.1016/j.gene.2020.144624

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  3 in total

1.  Modular, cascade-like transcriptional program of regeneration in Stentor.

Authors:  Pranidhi Sood; Athena Lin; Connie Yan; Rebecca McGillivary; Ulises Diaz; Tatyana Makushok; Ambika V Nadkarni; Sindy K Y Tang; Wallace F Marshall
Journal:  Elife       Date:  2022-08-04       Impact factor: 8.713

2.  Determining protein polarization proteome-wide using physical dissection of individual Stentor coeruleus cells.

Authors:  Athena Lin; Paul D Piehowski; Chia-Feng Tsai; Tatyana Makushok; Lian Yi; Ulises Diaz; Connie Yan; Diana Summers; Pranidhi Sood; Richard D Smith; Tao Liu; Wallace F Marshall
Journal:  Curr Biol       Date:  2022-04-20       Impact factor: 10.900

3.  RNA Interference by Cyanobacterial Feeding Demonstrates the SCSG1 Gene Is Essential for Ciliogenesis during Oral Apparatus Regeneration in Stentor.

Authors:  Wei Wei; Chuanqi Jiang; Xiaocui Chai; Juyuan Zhang; Cheng-Cai Zhang; Wei Miao; Jie Xiong
Journal:  Microorganisms       Date:  2021-01-15
  3 in total

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