Literature DB >> 32221804

Structure-Based Immunogenicity Prediction of Uricase from Fungal (Aspergillus flavus), Bacterial (Bacillus subtillis) and Mammalian Sources Using Immunoinformatic Approach.

Shikha Tripathi1, Jyotsna Parmar1, Awanish Kumar2.   

Abstract

Gout is a common rheumatic condition caused due to increase in serum uric acid level (hyperuricemia). Uricase is for lowering the level of uric acid but unfortunately, it is not produced in humans due to evolutionary changes. Therefore, it is administered to humans from outside in case of the high uric acid level in blood. A different formulation of uricase from bacterial, fungal, and mammalian sources is present in the market for the treatment of hyperuricemia conditions. Uricase formulation showed immunogenic response due to the occurrence of hypersensitivity reaction during the treatment that results in poor patient compliance. The purpose of this study was to clarify the variation of Uricase immunogenicity from different sources. We have used some immunoinformatic approaches to analyze and understand some structural aspects of immunogenic and allergenic epitopes of Uricase by calculation of relative frequency for eleven global alleles. As per our knowledge, this is the first immunoinformatic study of Uricase (structural based immunogenicity prediction) that deciphered the high immunogenic nature of Uricase but no significant difference in immunogenicity was found among Uricase isolated from Aspergillus flavus, Bacillus subtillis, and mammalian source. This study gives a further lead to develop some methods (include bioengineering of less immunogenic version of the uricase or utilizing the homologous enzymes) for minimizing immune response or search new sources of uricase that could be less or non-immunogenic.

Entities:  

Keywords:  Epitope; Gout; Immunogenicity; Immunoinformatic; Uricase

Year:  2020        PMID: 32221804     DOI: 10.1007/s10930-020-09886-0

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  39 in total

Review 1.  Therapeutic perspectives on uricases for gout.

Authors:  Ricardo P Garay; M Raafat El-Gewely; Jean-Pierre Labaune; Pascal Richette
Journal:  Joint Bone Spine       Date:  2012-02-25       Impact factor: 4.929

2.  Recombinant production of Aspergillus Flavus uricase and investigation of its thermal stability in the presence of raffinose and lactose.

Authors:  Mehdi Imani; Serveh Shahmohamadnejad
Journal:  3 Biotech       Date:  2017-06-30       Impact factor: 2.406

3.  AllerTOP v.2--a server for in silico prediction of allergens.

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Journal:  J Mol Model       Date:  2014-05-31       Impact factor: 1.810

Review 4.  Pegloticase: a novel agent for treatment-refractory gout.

Authors:  Jennifer A Shannon; Sabrina W Cole
Journal:  Ann Pharmacother       Date:  2012-03-06       Impact factor: 3.154

Review 5.  Pegloticase for chronic gout.

Authors:  Amy Anderson; Jasvinder A Singh
Journal:  Cochrane Database Syst Rev       Date:  2010-03-17

6.  Peptide binding predictions for HLA DR, DP and DQ molecules.

Authors:  Peng Wang; John Sidney; Yohan Kim; Alessandro Sette; Ole Lund; Morten Nielsen; Bjoern Peters
Journal:  BMC Bioinformatics       Date:  2010-11-22       Impact factor: 3.169

7.  Accurate pan-specific prediction of peptide-MHC class II binding affinity with improved binding core identification.

Authors:  Massimo Andreatta; Edita Karosiene; Michael Rasmussen; Anette Stryhn; Søren Buus; Morten Nielsen
Journal:  Immunogenetics       Date:  2015-09-29       Impact factor: 2.846

8.  A Therapeutic Uricase with Reduced Immunogenicity Risk and Improved Development Properties.

Authors:  Andrew C Nyborg; Chris Ward; Anna Zacco; Benoy Chacko; Luba Grinberg; James C Geoghegan; Ryan Bean; Michaela Wendeler; Frank Bartnik; Ellen O'Connor; Flaviu Gruia; Vidyashankara Iyer; Hui Feng; Varnika Roy; Mark Berge; Jeffrey N Miner; David M Wilson; Dongmei Zhou; Simone Nicholson; Clynn Wilker; Chi Y Wu; Susan Wilson; Lutz Jermutus; Herren Wu; David A Owen; Jane Osbourn; Steven Coats; Manuel Baca
Journal:  PLoS One       Date:  2016-12-21       Impact factor: 3.240

Review 9.  When myasthenia gravis is deemed refractory: clinical signposts and treatment strategies.

Authors:  Renato Mantegazza; Carlo Antozzi
Journal:  Ther Adv Neurol Disord       Date:  2018-01-18       Impact factor: 6.570

10.  Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries.

Authors:  John Sidney; Erika Assarsson; Carrie Moore; Sandy Ngo; Clemencia Pinilla; Alessandro Sette; Bjoern Peters
Journal:  Immunome Res       Date:  2008-01-25
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  2 in total

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Journal:  3 Biotech       Date:  2022-08-12       Impact factor: 2.893

Review 2.  Challenges in Serologic Diagnostics of Neglected Human Systemic Mycoses: An Overview on Characterization of New Targets.

Authors:  Moisés Morais Inácio; Vanessa Rafaela Milhomem Cruz-Leite; André Luís Elias Moreira; Karine Mattos; Juliano Domiraci Paccez; Orville Hernandez Ruiz; James Venturini; Marcia de Souza Carvalho Melhem; Anamaria Mello Miranda Paniago; Célia Maria de Almeida Soares; Simone Schneider Weber; Clayton Luiz Borges
Journal:  Pathogens       Date:  2022-05-11
  2 in total

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