Literature DB >> 32213336

SARS-CoV-2: virus dynamics and host response.

Yu Chen1, Lanjuan Li2.   

Abstract

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Year:  2020        PMID: 32213336      PMCID: PMC7156233          DOI: 10.1016/S1473-3099(20)30235-8

Source DB:  PubMed          Journal:  Lancet Infect Dis        ISSN: 1473-3099            Impact factor:   25.071


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Since December, 2019, coronavirus disease 2019 (COVID-19) has affected more than 100 000 patients globally. COVID-19 is caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and has a case-fatality rate of 2·3%, with higher rates among elderly patients and patients with comorbidities. Person-to-person transmission is efficient, with multiple clusters reported. Clinically, patients with COVID-19 present with respiratory symptoms, which is very similar to the presentation of other respiratory virus infections. Radiologically, COVID-19 is characterised by multifocal ground-glass opacities, even for patients with mild disease. Knowledge of virus dynamics and host response are essential for formulating strategies for antiviral treatment, vaccination, and epidemiological control of COVID-19. However, a systematic study on these aspects has not been done. In The Lancet Infectious Diseases, Kelvin To and colleagues report the viral load and antibody profiles of a cohort of 23 patients admitted to hospital with COVID-19. In these patients, the viral load peaked during the first week of illness then gradually declined over the second week. Viral load was also shown to correlate with age. Furthermore, both IgG and IgM antibodies started to increase on around day 10 after symptom onset, and most patients had seroconversion within the first 3 weeks. Finally, the IgG and IgM antibody level against the SARS-CoV-2 internal nucleoprotein and the surface spike receptor binding domain correlated with neutralising activity. These findings have several practical implications. First, the high viral load during the early phase of illness suggests that patients could be most infectious during this period, and it might account for the high transmissibility of SARS-CoV-2. Furthermore, the high viral load on presentation suggests that SARS-CoV-2 could be susceptible to emergence of antiviral resistance. Second, age was associated with viral load in this study, which could explain the high degree of severe disease in older patients with SARS-CoV-2.5, 6 The high viral load in elderly patients is associated not only with low immunity but also with high expression of the ACE2 receptor (the cell-entry receptor for SARS-CoV-2) in older adults. The timing of antibody seroconversion is crucial for determining the optimum timepoints for collecting serum specimens for antibody testing for diagnosis. Furthermore, this information is important for immunologists to choose the best timepoints for obtaining peripheral blood B cells for development of therapeutic monoclonal antibodies. The major strength of the study by To and colleagues is the systematic analysis of the serial viral load and antibody profile for up to 4 weeks, which provides insights into viral and host interactions during the acute and convalescent phases. Another notable aspect is that self-collected posterior oropharyngeal saliva samples were used, instead of nasopharyngeal specimens, for viral load monitoring. Collection of nasopharyngeal specimens is an invasive procedure, and it is uncomfortable for the patient and poses an infection risk to health-care workers. Self-collected saliva is much more acceptable to patients and is safer for health-care workers. This study clearly shows the feasibility of using saliva for viral load monitoring. The information provided by To and colleagues is solid scientific evidence on COVID-19 for clinicians and scientists. Nonetheless, many questions are still outstanding on the viral characteristics and host response during infection. SARS-CoV-2 has been detected in faeces, blood, and urine samples,9, 10 and it is important to ascertain viral load dynamics in such samples, for prevention and control of the pandemic. Furthermore, the relation between viral load and disease severity needs to be further clarified. Studies with a larger sample size are needed to understand how different factors can affect viral load or antibody response. For example, immunocompromised patients might have higher viral load, prolonged viral shedding, and impaired antibody response. Future studies in the paediatric population are vital, because children seem to have much milder disease than in adults. Finally, a more detailed understanding of the innate and adaptive immune response against SARS-CoV-2 is important for understanding the pathogenesis and for designing vaccines.
  8 in total

1.  Epidemiologic Features and Clinical Course of Patients Infected With SARS-CoV-2 in Singapore.

Authors:  Barnaby Edward Young; Sean Wei Xiang Ong; Shirin Kalimuddin; Jenny G Low; Seow Yen Tan; Jiashen Loh; Oon-Tek Ng; Kalisvar Marimuthu; Li Wei Ang; Tze Minn Mak; Sok Kiang Lau; Danielle E Anderson; Kian Sing Chan; Thean Yen Tan; Tong Yong Ng; Lin Cui; Zubaidah Said; Lalitha Kurupatham; Mark I-Cheng Chen; Monica Chan; Shawn Vasoo; Lin-Fa Wang; Boon Huan Tan; Raymond Tzer Pin Lin; Vernon Jian Ming Lee; Yee-Sin Leo; David Chien Lye
Journal:  JAMA       Date:  2020-04-21       Impact factor: 56.272

2.  Clinical findings in a group of patients infected with the 2019 novel coronavirus (SARS-Cov-2) outside of Wuhan, China: retrospective case series.

Authors:  Xiao-Wei Xu; Xiao-Xin Wu; Xian-Gao Jiang; Kai-Jin Xu; Ling-Jun Ying; Chun-Lian Ma; Shi-Bo Li; Hua-Ying Wang; Sheng Zhang; Hai-Nv Gao; Ji-Fang Sheng; Hong-Liu Cai; Yun-Qing Qiu; Lan-Juan Li
Journal:  BMJ       Date:  2020-02-19

3.  Temporal profiles of viral load in posterior oropharyngeal saliva samples and serum antibody responses during infection by SARS-CoV-2: an observational cohort study.

Authors:  Kelvin Kai-Wang To; Owen Tak-Yin Tsang; Wai-Shing Leung; Anthony Raymond Tam; Tak-Chiu Wu; David Christopher Lung; Cyril Chik-Yan Yip; Jian-Piao Cai; Jacky Man-Chun Chan; Thomas Shiu-Hong Chik; Daphne Pui-Ling Lau; Chris Yau-Chung Choi; Lin-Lei Chen; Wan-Mui Chan; Kwok-Hung Chan; Jonathan Daniel Ip; Anthony Chin-Ki Ng; Rosana Wing-Shan Poon; Cui-Ting Luo; Vincent Chi-Chung Cheng; Jasper Fuk-Woo Chan; Ivan Fan-Ngai Hung; Zhiwei Chen; Honglin Chen; Kwok-Yung Yuen
Journal:  Lancet Infect Dis       Date:  2020-03-23       Impact factor: 25.071

4.  A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster.

Authors:  Jasper Fuk-Woo Chan; Shuofeng Yuan; Kin-Hang Kok; Kelvin Kai-Wang To; Hin Chu; Jin Yang; Fanfan Xing; Jieling Liu; Cyril Chik-Yan Yip; Rosana Wing-Shan Poon; Hoi-Wah Tsoi; Simon Kam-Fai Lo; Kwok-Hung Chan; Vincent Kwok-Man Poon; Wan-Mui Chan; Jonathan Daniel Ip; Jian-Piao Cai; Vincent Chi-Chung Cheng; Honglin Chen; Christopher Kim-Ming Hui; Kwok-Yung Yuen
Journal:  Lancet       Date:  2020-01-24       Impact factor: 79.321

5.  Timely development of vaccines against SARS-CoV-2.

Authors:  Shan Lu
Journal:  Emerg Microbes Infect       Date:  2020-03-08       Impact factor: 7.163

6.  Public health might be endangered by possible prolonged discharge of SARS-CoV-2 in stool.

Authors:  Yu He; Zhengli Wang; Fang Li; Yuan Shi
Journal:  J Infect       Date:  2020-03-05       Impact factor: 6.072

7.  Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study.

Authors:  Fei Zhou; Ting Yu; Ronghui Du; Guohui Fan; Ying Liu; Zhibo Liu; Jie Xiang; Yeming Wang; Bin Song; Xiaoying Gu; Lulu Guan; Yuan Wei; Hui Li; Xudong Wu; Jiuyang Xu; Shengjin Tu; Yi Zhang; Hua Chen; Bin Cao
Journal:  Lancet       Date:  2020-03-11       Impact factor: 79.321

8.  Characteristics of and Important Lessons From the Coronavirus Disease 2019 (COVID-19) Outbreak in China: Summary of a Report of 72 314 Cases From the Chinese Center for Disease Control and Prevention.

Authors:  Zunyou Wu; Jennifer M McGoogan
Journal:  JAMA       Date:  2020-04-07       Impact factor: 56.272

  8 in total
  90 in total

1.  Adult stem cell-derived complete lung organoid models emulate lung disease in COVID-19.

Authors:  Courtney Tindle; MacKenzie Fuller; Ayden Fonseca; Sahar Taheri; Pradipta Ghosh; Soumita Das; Stella-Rita Ibeawuchi; Nathan Beutler; Gajanan Dattatray Katkar; Amanraj Claire; Vanessa Castillo; Moises Hernandez; Hana Russo; Jason Duran; Laura E Crotty Alexander; Ann Tipps; Grace Lin; Patricia A Thistlethwaite; Ranajoy Chattopadhyay; Thomas F Rogers; Debashis Sahoo
Journal:  Elife       Date:  2021-08-13       Impact factor: 8.140

2.  Assessment of the relationship between exposure to air pollutants and COVID-19 pandemic in Tehran city, Iran.

Authors:  Davood Namdar-Khojasteh; Bijan Yeghaneh; Ali Maher; Farzaneh Namdar-Khojasteh; Jun Tu
Journal:  Atmos Pollut Res       Date:  2022-06-11       Impact factor: 4.831

Review 3.  Combating COVID-19 Using Generative Adversarial Networks and Artificial Intelligence for Medical Images: Scoping Review.

Authors:  Hazrat Ali; Zubair Shah
Journal:  JMIR Med Inform       Date:  2022-06-29

4.  Differences in saliva ACE2 activity among infected and non-infected adult and pediatric population exposed to SARS-CoV-2.

Authors:  Daniel Jiménez; Javier Martínez-Sanz; Talía Sainz; Cristina Calvo; Ana Méndez-Echevarría; Elena Moreno; Daniel Blázquez-Gamero; Pilar Vizcarra; Mario Rodríguez; Robert Jenkins; Matilde Sánchez-Conde; Raquel Ron; Francesca Norman; Santiago Moreno; Manuel Ferrer; Sergio Serrano-Villar
Journal:  J Infect       Date:  2022-04-29       Impact factor: 38.637

Review 5.  Targeting the viral-entry facilitators of SARS-CoV-2 as a therapeutic strategy in COVID-19.

Authors:  Shibi Muralidar; Gayathri Gopal; Senthil Visaga Ambi
Journal:  J Med Virol       Date:  2021-05-03       Impact factor: 20.693

6.  Spectrum of chest computed tomographic (CT) findings in coronavirus disease-19 (COVID-19) patients in India.

Authors:  Arshed Hussain Parry; Abdul Haseeb Wani; Mudasira Yaseen; Khurshid Ahmad Dar; Naseer Ahmad Choh; Naseer Ahmad Khan; Naveed Nazir Shah; Majid Jehangir
Journal:  Eur J Radiol       Date:  2020-06-24       Impact factor: 3.528

7.  Beyond the virus: a first look at coronavirus-themed Android malware.

Authors:  Liu Wang; Ren He; Haoyu Wang; Pengcheng Xia; Yuanchun Li; Lei Wu; Yajin Zhou; Xiapu Luo; Yulei Sui; Yao Guo; Guoai Xu
Journal:  Empir Softw Eng       Date:  2021-06-12       Impact factor: 2.522

8.  Significance of peripheral blood indexes in differential diagnoses of SARS-CoV-2 and New Bunia virus.

Authors:  Wentao He; Xiaoyi Liu
Journal:  Sci Rep       Date:  2021-07-08       Impact factor: 4.379

Review 9.  The Long Road Toward COVID-19 Herd Immunity: Vaccine Platform Technologies and Mass Immunization Strategies.

Authors:  Lea Skak Filtenborg Frederiksen; Yibang Zhang; Camilla Foged; Aneesh Thakur
Journal:  Front Immunol       Date:  2020-07-21       Impact factor: 7.561

10.  Antibody responses against SARS-CoV-2 in COVID-19 patients.

Authors:  Anding Liu; Ying Li; Jing Peng; Yuancheng Huang; Dong Xu
Journal:  J Med Virol       Date:  2020-08-02       Impact factor: 20.693

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