Literature DB >> 32212692

Expressed Protein Ligation without Intein.

Yuchen Qiao1, Ge Yu1, Kaci C Kratch1, Xiaoyan Aria Wang1, Wesley Wei Wang1, Sunshine Z Leeuwon1, Shiqing Xu1, Jared S Morse1, Wenshe Ray Liu1,2,3.   

Abstract

Proteins with a functionalized C-terminus such as a C-terminal thioester are key to the synthesis of larger proteins via expressed protein ligation. They are usually made by recombinant fusion to intein. Although powerful, the intein fusion approach suffers from premature hydrolysis and low compatibility with denatured conditions. To totally bypass the involvement of an enzyme for expressed protein ligation, here we showed tn class="Chemical">hat a cysteine in a recombinant protein was chemically activated by a small molecule cyanylating reagent at its N-side amide for undergoing nucleophilic acyl substitution with amines including a number of l- and d-amino acids and hydrazine. The afforded protein hydrazides could be used further for expressed protein ligation. We demonstrated the versatility of this activated cysteine-directed protein ligation (ACPL) approach with the successful synthesis of ubiquitin conjugates, ubiquitin-like protein conjugates, histone H2A with a C-terminal posttranslational modification, RNase H that actively hydrolyzed RNA, and exenatide that is a commercial therapeutic peptide. The technique, which is exceedingly simple but highly useful, expands to a great extent the synthetic capacity of protein chemistry and will therefore make a large avenue of new research possible.

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Year:  2020        PMID: 32212692      PMCID: PMC7249697          DOI: 10.1021/jacs.0c00252

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  44 in total

1.  CLEAVAGE OF THE PEPTIDE BOND AT THE CYSTINE AMINO GROUP BY THE ACTION OF CYANIDE.

Authors:  J L WOOD; N CATSIMPOOLAS
Journal:  J Biol Chem       Date:  1963-08       Impact factor: 5.157

Review 2.  Protein semisynthesis and expressed protein ligation: chasing a protein's tail.

Authors:  Dirk Schwarzer; Philip A Cole
Journal:  Curr Opin Chem Biol       Date:  2005-10-13       Impact factor: 8.822

3.  Histone H4-K16 acetylation controls chromatin structure and protein interactions.

Authors:  Michael Shogren-Knaak; Haruhiko Ishii; Jian-Min Sun; Michael J Pazin; James R Davie; Craig L Peterson
Journal:  Science       Date:  2006-02-10       Impact factor: 47.728

4.  Modulation of intein activity by its neighboring extein substrates.

Authors:  Gil Amitai; Brian P Callahan; Matt J Stanger; Georges Belfort; Marlene Belfort
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-17       Impact factor: 11.205

5.  Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation.

Authors:  Robert K McGinty; Jaehoon Kim; Champak Chatterjee; Robert G Roeder; Tom W Muir
Journal:  Nature       Date:  2008-04-30       Impact factor: 49.962

6.  Protein chemical synthesis by ligation of peptide hydrazides.

Authors:  Ge-Min Fang; Yi-Ming Li; Fei Shen; Yi-Chao Huang; Jia-Bin Li; Yun Lin; Hong-Kui Cui; Lei Liu
Journal:  Angew Chem Int Ed Engl       Date:  2011-06-06       Impact factor: 15.336

7.  The in vitro ligation of bacterially expressed proteins using an intein from Methanobacterium thermoautotrophicum.

Authors:  T C Evans; J Benner; M Q Xu
Journal:  J Biol Chem       Date:  1999-02-12       Impact factor: 5.157

8.  Specific cleavage of cystine peptides by cyanide.

Authors:  N Catsimpoolas; J L Wood
Journal:  J Biol Chem       Date:  1966-04-25       Impact factor: 5.157

9.  NMR and crystal structures of the Pyrococcus horikoshii RadA intein guide a strategy for engineering a highly efficient and promiscuous intein.

Authors:  Jesper S Oeemig; Dongwen Zhou; Tommi Kajander; Alexander Wlodawer; Hideo Iwaï
Journal:  J Mol Biol       Date:  2012-05-02       Impact factor: 5.469

10.  The Molecular Basis for Ubiquitin and Ubiquitin-like Specificities in Bacterial Effector Proteases.

Authors:  Jonathan N Pruneda; Charlotte H Durkin; Paul P Geurink; Huib Ovaa; Balaji Santhanam; David W Holden; David Komander
Journal:  Mol Cell       Date:  2016-07-14       Impact factor: 17.970

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  5 in total

1.  Protein Synthesis via Activated Cysteine-Directed Protein Ligation.

Authors:  Ge Yu; Yuchen Qiao; Lauren R Blankenship; Wenshe Ray Liu
Journal:  Methods Mol Biol       Date:  2022

Review 2.  Greening the synthesis of peptide therapeutics: an industrial perspective.

Authors:  Vincent Martin; Peter H G Egelund; Henrik Johansson; Sebastian Thordal Le Quement; Felix Wojcik; Daniel Sejer Pedersen
Journal:  RSC Adv       Date:  2020-11-24       Impact factor: 4.036

3.  Traceless enzymatic protein synthesis without ligation sites constraint.

Authors:  Ruifeng Li; Marcel Schmidt; Tong Zhu; Xinyu Yang; Jing Feng; Yu'e Tian; Yinglu Cui; Timo Nuijens; Bian Wu
Journal:  Natl Sci Rev       Date:  2021-08-24       Impact factor: 23.178

4.  Site-Specific Conversion of Cysteine in a Protein to Dehydroalanine Using 2-Nitro-5-thiocyanatobenzoic Acid.

Authors:  Yuchen Qiao; Ge Yu; Sunshine Z Leeuwon; Wenshe Ray Liu
Journal:  Molecules       Date:  2021-04-29       Impact factor: 4.411

5.  Drug Repurposing for the SARS-CoV-2 Papain-Like Protease.

Authors:  Chia-Chuan Cho; Shuhua G Li; Tyler J Lalonde; Kai S Yang; Ge Yu; Yuchen Qiao; Shiqing Xu; Wenshe Ray Liu
Journal:  ChemMedChem       Date:  2021-10-12       Impact factor: 3.540

  5 in total

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