| Literature DB >> 32208454 |
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Abstract
[This corrects the article DOI: 10.1371/journal.pone.0227804.].Entities:
Year: 2020 PMID: 32208454 PMCID: PMC7092966 DOI: 10.1371/journal.pone.0231023
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Results from estimation of simulated networks using EstimNetDirected estimating Type II error rate.
| N | Attributes | Effect | Bias | RMSE | estim. | lower | upper | in C.I. (%) | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 2000 | Categorical | A2P-TD | -0.0285 | 0.0411 | 40 | 31 | 50 | 100 | 100 | 32.00 |
| 2000 | Categorical | AinS | 0.0060 | 0.1298 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Categorical | AKT-T | 0.0157 | 0.0208 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Categorical | AoutS | -0.4346 | 0.4506 | 0 | 0 | 4 | 98 | 100 | 32.00 |
| 2000 | Categorical | Arc | 0.5514 | 0.6120 | 100 | 96 | 100 | 85 | 100 | 32.00 |
| 2000 | Categorical | Matching | -0.0058 | 0.0396 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Categorical | MatchingReciprocity | 0.0930 | 0.2901 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Categorical | Reciprocity | -0.0636 | 0.2745 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Binary | A2P-TD | -0.0243 | 0.0439 | 69 | 59 | 77 | 100 | 100 | 31.98 |
| 2000 | Binary | AinS | -0.0109 | 0.0974 | 0 | 0 | 4 | 100 | 100 | 31.98 |
| 2000 | Binary | AKT-T | 0.0316 | 0.1335 | 3 | 1 | 8 | 90 | 100 | 31.98 |
| 2000 | Binary | AoutS | -0.2228 | 0.2395 | 0 | 0 | 4 | 100 | 100 | 31.98 |
| 2000 | Binary | Arc | 0.2118 | 0.3077 | 67 | 57 | 75 | 98 | 100 | 31.98 |
| 2000 | Binary | Interaction | -0.1350 | 0.1915 | 0 | 0 | 4 | 50 | 100 | 31.98 |
| 2000 | Binary | Receiver | -0.0348 | 0.1083 | 0 | 0 | 4 | 97 | 100 | 31.98 |
| 2000 | Binary | Reciprocity | -0.1359 | 0.1638 | 0 | 0 | 4 | 63 | 100 | 31.98 |
| 2000 | Binary | Sender | -0.2470 | 0.2617 | 0 | 0 | 4 | 16 | 100 | 31.98 |
The “estim.”, “lower”, and “upper” columns show the point estimate and lower and upper 95% confidence interval (C.I.), respectively, of the Type II error rate (false negative rate). This C.I. is computed as the Wilson score interval. The “in C.I. (%)” column is the coverage rate for the nominal 95% confidence interval of the EstimNetDirected point and standard error estimates. Results are over 100 networks, each of which has 32 parallel estimation runs. N is the number of networks for which a converged estimate was found (out of 100). is the mean number of runs that converged (out of 32). Runs that did not converge are not included in the estimates.
Results from estimation of full network using EstimNetDirected estimating Type I error rate.
| N | Attributes | Effect | Bias | RMSE | estim. | lower | upper | in C.I. (%) | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 2000 | Categorical | A2P-TD | -0.0217 | 0.0657 | 1 | 0 | 5 | 99 | 100 | 31.94 |
| 2000 | Categorical | AinS | -0.0017 | 0.0648 | 1 | 0 | 5 | 99 | 100 | 32.00 |
| 2000 | Categorical | AKT-T | -0.0154 | 0.0837 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Categorical | AoutS | -0.0129 | 0.0706 | 1 | 0 | 5 | 99 | 100 | 32.00 |
| 2000 | Categorical | Matching | 0.0239 | 0.0440 | 11 | 6 | 19 | 89 | 100 | 32.00 |
| 2000 | Categorical | MatchingReciprocity | 0.1246 | 0.1981 | 9 | 5 | 16 | 91 | 100 | 32.00 |
| 2000 | Categorical | Reciprocity | 0.4809 | 0.5493 | 2 | 1 | 7 | 98 | 100 | 30.86 |
| 2000 | Binary | A2P-TD | -0.0143 | 0.0198 | 2 | 1 | 7 | 98 | 100 | 32.00 |
| 2000 | Binary | AinS | -0.1234 | 0.1830 | 1 | 0 | 5 | 99 | 100 | 32.00 |
| 2000 | Binary | AKT-T | -0.2473 | 0.5563 | 1 | 0 | 5 | 99 | 100 | 29.32 |
| 2000 | Binary | AoutS | -0.0011 | 0.0954 | 0 | 0 | 4 | 100 | 100 | 32.00 |
| 2000 | Binary | Interaction | -0.7966 | 3.0590 | 4 | 1 | 15 | 96 | 46 | 7.02 |
| 2000 | Binary | Receiver | 0.0313 | 0.1577 | 5 | 2 | 11 | 95 | 100 | 31.33 |
| 2000 | Binary | Reciprocity | -0.3127 | 1.2360 | 0 | 0 | 14 | 100 | 24 | 6.96 |
| 2000 | Binary | Sender | 0.0244 | 0.1252 | 2 | 1 | 7 | 98 | 100 | 30.73 |
The “estim.”, “lower”, and “upper” columns show the point estimate and lower and upper 95% confidence interval (C.I.), respectively, of the Type I error rate (false positive rate). This C.I. is computed as the Wilson score interval. The “in C.I. (%)” column is the coverage rate for the nominal 95% confidence interval of the EstimNetDirected point and standard error estimates. Results are over 100 networks, each of which has 32 parallel estimation runs. N is the number of networks for which a converged estimate was found (out of 100). is the mean number of runs that converged (out of 32). Runs that did not converge are not included in the estimates.