Literature DB >> 32202912

Identification of Key Genes in Association with Progression and Prognosis in Cervical Squamous Cell Carcinoma.

Huangyang Meng1, Jinhui Liu1, Jiangnan Qiu1, Sipei Nie1, Yi Jiang1, Yicong Wan1, Wenjun Cheng1.   

Abstract

Cervical cancer remains a primary cause of female death in developing countries, but its prognosis can be greatly improved if patients are diagnosed earlier. In the present study, we screened the common differentially expressed genes (DEGs) of cervical squamous cell carcinoma (CESC) from dataset GSE7803, Gene Expression Omnibus, and The Cancer Genome Atlas databases. An integrated bioinformatics analysis was performed based on these DEGs for their enrichment in functions and pathways, interaction network, prognostic signature, and candidate molecular drugs. As a result, 164 (114 upregulated and 47 downregulated) DEGs of CESC were identified for further investigation. We then conducted the gene ontology term enrichment and Kyoto Encyclopedia of Genes and Genomes Pathway analyses to reveal the underlying functions and pathways of these DEGs. In the protein-protein interaction network, hub module and hub genes were identified. Five genes of significant prognostic value-DSG2, ITM2A, CENPM, RIBC2, and MEIS2-were identified by prognostic signature analysis and used to construct a risk linear model. Further validation and investigation suggested DSG2 might be a key gene in CESC prognosis. We then identified two candidate small molecules (trichostatin A and tanespimycin) against CESC. Further validation and exploration of these hub genes are warranted for future prospect in clinical applications.

Entities:  

Keywords:  bioinformatics analysis; biomarker; cervical squamous cell carcinoma; differentially expressed genes; risk model

Mesh:

Substances:

Year:  2020        PMID: 32202912     DOI: 10.1089/dna.2019.5202

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  7 in total

1.  Construction of a four-mRNA prognostic signature with its ceRNA network in CESC.

Authors:  Lang Li; Qiusheng Guo; Gaochen Lan; Fei Liu; Wenwu Wang; Xianmei Lv
Journal:  Sci Rep       Date:  2022-06-23       Impact factor: 4.996

2.  Identifying a cervical cancer survival signature based on mRNA expression and genome-wide copy number variations.

Authors:  Nan Li; Kai Yu; Zhong Lin; Dingyuan Zeng
Journal:  Exp Biol Med (Maywood)       Date:  2021-10-21

3.  ITM2A as a Tumor Suppressor and Its Correlation With PD-L1 in Breast Cancer.

Authors:  Rui Zhang; Tao Xu; Yu Xia; Zhi Wang; Xingrui Li; Wen Chen
Journal:  Front Oncol       Date:  2021-02-12       Impact factor: 6.244

4.  Identification of a novel six-gene signature with potential prognostic and therapeutic value in cervical cancer.

Authors:  Xinyu Qu; Zhiwen Shi; Jingjing Guo; Chenyan Guo; Junjun Qiu; Keqin Hua
Journal:  Cancer Med       Date:  2021-09-08       Impact factor: 4.452

5.  Bioinformatics Screening of Potential Biomarkers from mRNA Expression Profiles to Discover Drug Targets and Agents for Cervical Cancer.

Authors:  Md Selim Reza; Md Harun-Or-Roshid; Md Ariful Islam; Md Alim Hossen; Md Tofazzal Hossain; Shengzhong Feng; Wenhui Xi; Md Nurul Haque Mollah; Yanjie Wei
Journal:  Int J Mol Sci       Date:  2022-04-02       Impact factor: 5.923

6.  Metadata analysis to explore hub of the hub-genes highlighting their functions, pathways and regulators for cervical cancer diagnosis and therapies.

Authors:  Md Selim Reza; Md Alim Hossen; Md Harun-Or-Roshid; Mst Ayesha Siddika; Md Hadiul Kabir; Md Nurul Haque Mollah
Journal:  Discov Oncol       Date:  2022-08-22

7.  miR-125a attenuates the malignant biological behaviors of cervical squamous cell carcinoma cells through Rad51.

Authors:  Zeping Liu; Jinchang Huang; Qiuju Jiang; Xiaoling Li; Xiaohui Tang; Shasha Chen; Liling Jiang; Genghua Fu; Sijun Liu
Journal:  Bioengineered       Date:  2022-04       Impact factor: 6.832

  7 in total

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