Literature DB >> 32202879

Construction of a Pathway Map on a Complicated Energy Landscape.

Jianyuan Yin1, Yiwei Wang2, Jeff Z Y Chen3, Pingwen Zhang1, Lei Zhang4.   

Abstract

How do we search for the entire family tree of possible intermediate states, without unwanted random guesses, starting from a stationary state on the energy landscape all the way down to energy minima? Here we introduce a general numerical method that constructs the pathway map, which guides our understanding of how a physical system moves on the energy landscape. The method identifies the transition state between energy minima and the energy barrier associated with such a state. As an example, we solve the Landau-de Gennes energy incorporating the Dirichlet boundary conditions to model a liquid crystal confined in a square box; we illustrate the basic concepts by examining the multiple stationary solutions and the connected pathway maps of the model.

Year:  2020        PMID: 32202879     DOI: 10.1103/PhysRevLett.124.090601

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  3 in total

1.  Transition pathways connecting crystals and quasicrystals.

Authors:  Jianyuan Yin; Kai Jiang; An-Chang Shi; Pingwen Zhang; Lei Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-07       Impact factor: 12.779

2.  Elastic anisotropy in the reduced Landau-de Gennes model.

Authors:  Yucen Han; Joseph Harris; Apala Majumdar; Lei Zhang
Journal:  Proc Math Phys Eng Sci       Date:  2022-05-25       Impact factor: 3.213

3.  Computable early Caenorhabditis elegans embryo with a phase field model.

Authors:  Xiangyu Kuang; Guoye Guan; Ming-Kin Wong; Lu-Yan Chan; Zhongying Zhao; Chao Tang; Lei Zhang
Journal:  PLoS Comput Biol       Date:  2022-01-14       Impact factor: 4.475

  3 in total

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