Literature DB >> 32196811

A protective polymorphism in MMP16, improved blood gas levels, and chronic obstructive pulmonary diseases: Family and two population-based studies.

Zili Zhang1, Jian Wang1,2, Zeguang Zheng1, Xindong Chen3, Guihua Xu4, Sifan Chen5, Fei Liu1, Lingdan Chen1, Mingjing Ding4, Liang Yuan1, Yuanyuan Li1, Jing Qian1, Xiaohui Xie1, Bingxian Deng1, Wenju Lu1,2.   

Abstract

The aberrant expression of matrix metalloproteinases (MMPs) is known to contribute to the pathogenesis of airway remodeling and alveolar disruption in chronic obstructive pulmonary disease (COPD). In the discovery stage, 11 COPD from five families were subjected to whole-genome sequencing, and 21 common polymorphisms in MMPs and TIMPs were identified. These polymorphisms were genotyped in two subsequent verification studies. Of these polymorphisms, c.2392G>A (rs2664370T>C) and c.4158C>A (rs2664369T>G) in MMP16 remained significantly different. Functionally, we found that MMP16 expression was significantly increased in peripheral blood monocytes (PBMCs) from COPD and in cigarette smoke extract-treated 16HBE cells compared with controls. This was also shown by bioinformatics analysis. COPD carrying rs2664370CC showed decreased levels of MMP16 in the plasma and in PBMCs compared with those carrying CT and TT. Treatment with hsa-miR-576-5p mimics led to a greater reduction in luciferase reporter activity in cells transfected with rs2664370CC. Moreover, blood levels of base excess, PCO2 , and PO2 in COPD with rs2664370CC were significantly lower than those with rs2664370CT+TT. Taken together, these results demonstrate that the rs2664370T>C polymorphism in MMP16 protects against the risk of COPD, likely by favoring interaction with hsa-miR-576-5p, leading to reduced MMP16 expression and improved blood gas levels.
© 2020 Wiley Periodicals, Inc.

Entities:  

Keywords:  COPD; Hsa-miR-576-5p; MMP16; WGS; blood gas

Year:  2020        PMID: 32196811     DOI: 10.1002/humu.24013

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  1 in total

1.  Whole-Exome Sequencing Implicates the USP34 rs777591A > G Intron Variant in Chronic Obstructive Pulmonary Disease in a Kashi Cohort.

Authors:  Jingran Xu; Li Li; Jie Ren; Xuemei Zhong; Chengxin Xie; Aifang Zheng; Ayiguzali Abudukadier; Maimaitiaili Tuerxun; Sujie Zhang; Lifeng Tang; Dilare Hairoula; Xiaoguang Zou
Journal:  Front Cell Dev Biol       Date:  2022-02-07
  1 in total

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